Lonepinella koalarum strain DSM 10053

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Lonepinella

Description

Lonepinella koalarum strain DSM 10053 is a microaerophilic bacterium characterized by its ability to thrive in environments with reduced oxygen levels. This trait is significant as it suggests a specialized ecological niche where the organism can effectively metabolize and survive, potentially influencing local microbial community dynamics. The strain possesses a single replicon, which is indicative of its genetic structure and may impact its replication and evolutionary adaptability. The genome of Lonepinella koalarum is accessible under the accession number SMGJ00000000.1, allowing for further genetic studies and comparative analyses with other microorganisms. The microaerophilic nature of this strain suggests that it may play a role in specific biogeochemical processes, particularly in environments where oxygen concentrations fluctuate. This characteristic allows it to occupy a unique position in microbial communities, where its metabolic pathways may contribute to the cycling of nutrients and the overall health of the ecosystem. Understanding the ecological roles and interactions of Lonepinella koalarum can provide insights into the functioning of microbial ecosystems, particularly in habitats where oxygen levels are limited.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusLonepinella
SpeciesLonepinella koalarum
Strainstrain DSM 10053

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lonepinella koalarum strain DSM 10053 Ga0310530_117, whole genome

Gene Summary

Adenine Count

754675 bp

Thymine Count

759608 bp

Guanine Count

481482 bp

Cytosine Count

490717 bp

Genome Length

2486773 bp

Protein-coding Genes

2229 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xylose abc transporter membrane proteinEV692_0273Not AvailableNegative275549 - 27667639744.1
xylose abc transporter atp-binding proteinEV692_0274Not AvailableNegative276673 - 27819355891.6
xylose-binding proteinEV692_0275Not AvailableNegative278268 - 27926935868.0
gph family glycoside/pentoside/hexuronide:cation symporterEV692_0276Not AvailableNegative279549 - 28089248856.7
glycosyl hydrolase family 43EV692_0277Not AvailableNegative280894 - 28230953528.1
d-xylose isomeraseEV692_0278Not AvailablePositive282537 - 28385649577.5
xylulokinaseEV692_0279Not AvailablePositive283913 - 28536152561.8
na+ dependent nucleoside transporterEV692_0280Not AvailableNegative285334 - 28576515317.4
pseudouridine-5'-phosphate glycosidaseEV692_0281Not AvailableNegative285810 - 28672432424.1
pseudouridine kinaseEV692_0282Not AvailableNegative286721 - 28780939259.5

Displaying genes 361 – 370 of 2362 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.