Lonepinella koalarum strain DSM 10053

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Lonepinella

Description

Lonepinella koalarum strain DSM 10053 is a microaerophilic bacterium characterized by its ability to thrive in environments with reduced oxygen levels. This trait is significant as it suggests a specialized ecological niche where the organism can effectively metabolize and survive, potentially influencing local microbial community dynamics. The strain possesses a single replicon, which is indicative of its genetic structure and may impact its replication and evolutionary adaptability. The genome of Lonepinella koalarum is accessible under the accession number SMGJ00000000.1, allowing for further genetic studies and comparative analyses with other microorganisms. The microaerophilic nature of this strain suggests that it may play a role in specific biogeochemical processes, particularly in environments where oxygen concentrations fluctuate. This characteristic allows it to occupy a unique position in microbial communities, where its metabolic pathways may contribute to the cycling of nutrients and the overall health of the ecosystem. Understanding the ecological roles and interactions of Lonepinella koalarum can provide insights into the functioning of microbial ecosystems, particularly in habitats where oxygen levels are limited.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusLonepinella
SpeciesLonepinella koalarum
Strainstrain DSM 10053

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lonepinella koalarum strain DSM 10053 Ga0310530_117, whole genome

Gene Summary

Adenine Count

754675 bp

Thymine Count

759608 bp

Guanine Count

481482 bp

Cytosine Count

490717 bp

Genome Length

2486773 bp

Protein-coding Genes

2229 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
menaquinone-dependent protoporphyrinogen oxidaseEV692_0002Not AvailableNegative738 - 125019710.6
trk system potassium uptake protein trkhEV692_0003Not AvailableNegative1250 - 271353699.0
trna 2-thiouridine synthesizing protein aEV692_0004Not AvailablePositive2846 - 31039831.98
nadh dehydrogenaseEV692_0005Not AvailableNegative3135 - 446948615.9
uncharacterized protein ycekEV692_0006Not AvailablePositive4614 - 48418530.44
atp-dependent dna helicase repEV692_0007Not AvailablePositive4841 - 686878012.5
Trna-serNot AvailableNot AvailablePositive6966 - 7056Not Available
Trna-argNot AvailableNot AvailablePositive7095 - 7168Not Available
Trna-argNot AvailableNot AvailablePositive7222 - 7295Not Available
had superfamily hydrolase (tigr01509 family)/beta-phosphoglucomutase family hydrolaseEV692_0011Not AvailablePositive7723 - 832522475.3

Displaying genes 91 – 100 of 2362 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.