Cocleimonas flava strain DSM 24830

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Cocleimonas

Description

Cocleimonas flava strain DSM 24830 is a Gram-negative, aerobic, rod-shaped bacterium. It is characterized by its mesophilic nature, with an optimal growth temperature of 25°C, indicating that it thrives in moderate temperature conditions. This strain exhibits non-motile behavior, suggesting that it does not possess flagella or other structures for active movement. Cocleimonas flava is notable for having a single replicon, which is a defining feature of its genetic organization. The strain is cataloged under the sequence accession number SMFQ00000000.1, which provides a reference point for genetic studies and further characterization. Biologically, the aerobic nature of Cocleimonas flava suggests that it plays a role in environments where oxygen is available, potentially participating in processes such as organic matter decomposition or nutrient cycling in its ecological niche. The mesophilic temperature range aligns with conditions commonly found in terrestrial environments, which may influence its interactions with other microorganisms and its overall ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusCocleimonas
SpeciesCocleimonas flava
Strainstrain DSM 24830

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
Habitatbrood pouch
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cocleimonas flava strain DSM 24830 Ga0310460_109, whole genome

Gene Summary

Adenine Count

1348133 bp

Thymine Count

1321014 bp

Guanine Count

871896 bp

Cytosine Count

950339 bp

Genome Length

4491576 bp

Protein-coding Genes

3988 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysm domain-containing proteinEV695_3668Not AvailableNegative4013086 - 401391628951.1
membrane protein yqaa with snare-associated domainEV695_3669Not AvailableNegative4013936 - 401452021874.3
protein-l-isoaspartate(d-aspartate) o-methyltransferaseEV695_3670Not AvailableNegative4014608 - 401529725335.4
5'-nucleotidase /3'-nucleotidase /exopolyphosphataseEV695_3671Not AvailableNegative4015258 - 401604028090.4
dna-nicking smr family endonucleaseEV695_3672Not AvailablePositive4016117 - 401674624158.7
putative membrane protein ypha (doxx/surf4 family)EV695_3673Not AvailableNegative4016900 - 401755924527.3
uncharacterized protein yjis (duf1127 family)EV695_3674Not AvailableNegative4017681 - 40179118951.73
dna-binding transcriptional lysr family regulatorEV695_3675Not AvailablePositive4018243 - 401913032973.9
3-hydroxyisobutyrate dehydrogenaseEV695_3676Not AvailablePositive4019241 - 402012832128.0
hypothetical proteinEV695_3677Not AvailablePositive4020138 - 402049713557.0

Displaying genes 3641 – 3650 of 4033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.