Cocleimonas flava strain DSM 24830

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Cocleimonas

Description

Cocleimonas flava strain DSM 24830 is a Gram-negative, aerobic, rod-shaped bacterium. It is characterized by its mesophilic nature, with an optimal growth temperature of 25°C, indicating that it thrives in moderate temperature conditions. This strain exhibits non-motile behavior, suggesting that it does not possess flagella or other structures for active movement. Cocleimonas flava is notable for having a single replicon, which is a defining feature of its genetic organization. The strain is cataloged under the sequence accession number SMFQ00000000.1, which provides a reference point for genetic studies and further characterization. Biologically, the aerobic nature of Cocleimonas flava suggests that it plays a role in environments where oxygen is available, potentially participating in processes such as organic matter decomposition or nutrient cycling in its ecological niche. The mesophilic temperature range aligns with conditions commonly found in terrestrial environments, which may influence its interactions with other microorganisms and its overall ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusCocleimonas
SpeciesCocleimonas flava
Strainstrain DSM 24830

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
Habitatbrood pouch
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cocleimonas flava strain DSM 24830 Ga0310460_109, whole genome

Gene Summary

Adenine Count

1348133 bp

Thymine Count

1321014 bp

Guanine Count

871896 bp

Cytosine Count

950339 bp

Genome Length

4491576 bp

Protein-coding Genes

3988 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxinEV695_3204Not AvailablePositive3531032 - 353146615774.1
radical sam superfamily enzyme ygiq (upf0313 family)EV695_3205Not AvailablePositive3532132 - 353366458556.5
hypothetical proteinEV695_3206Not AvailablePositive3533918 - 35341608472.21
rhombotail lipoproteinEV695_3207Not AvailableNegative3534195 - 353520837783.7
hypothetical proteinEV695_3208Not AvailableNegative3535547 - 35357778051.59
tfda family taurine catabolism dioxygenase taudEV695_3209Not AvailablePositive3536306 - 353737640385.0
cro/c1-type helix-turn-helix dna-binding proteinEV695_3210Not AvailableNegative3537414 - 353814828391.3
cystathionine beta-lyaseEV695_3211Not AvailablePositive3538318 - 353951745393.9
uncharacterized protein ybjq (upf0145 family)EV695_3212Not AvailablePositive3539604 - 353993011714.0
uncharacterized protein ybjq (upf0145 family)EV695_3213Not AvailablePositive3540016 - 354045916749.5

Displaying genes 3181 – 3190 of 4033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.