Cocleimonas flava strain DSM 24830

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Cocleimonas

Description

Cocleimonas flava strain DSM 24830 is a Gram-negative, aerobic, rod-shaped bacterium. It is characterized by its mesophilic nature, with an optimal growth temperature of 25°C, indicating that it thrives in moderate temperature conditions. This strain exhibits non-motile behavior, suggesting that it does not possess flagella or other structures for active movement. Cocleimonas flava is notable for having a single replicon, which is a defining feature of its genetic organization. The strain is cataloged under the sequence accession number SMFQ00000000.1, which provides a reference point for genetic studies and further characterization. Biologically, the aerobic nature of Cocleimonas flava suggests that it plays a role in environments where oxygen is available, potentially participating in processes such as organic matter decomposition or nutrient cycling in its ecological niche. The mesophilic temperature range aligns with conditions commonly found in terrestrial environments, which may influence its interactions with other microorganisms and its overall ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusCocleimonas
SpeciesCocleimonas flava
Strainstrain DSM 24830

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
Habitatbrood pouch
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cocleimonas flava strain DSM 24830 Ga0310460_109, whole genome

Gene Summary

Adenine Count

1348133 bp

Thymine Count

1321014 bp

Guanine Count

871896 bp

Cytosine Count

950339 bp

Genome Length

4491576 bp

Protein-coding Genes

3988 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fist-like proteinEV695_3133Not AvailablePositive3456149 - 345728242333.1
diguanylate cyclase (ggdef)-like proteinEV695_3134Not AvailablePositive3457279 - 345946883983.8
integral membrane proteinEV695_3135Not AvailableNegative3459533 - 345982910801.8
polar amino acid transport system substrate-binding proteinEV695_3136Not AvailableNegative3460048 - 346079428328.3
amino acid abc transporter substrate-binding protein (paat family)EV695_3137Not AvailableNegative3461161 - 346196130518.7
dimethylsulfoniopropionate lyase dddlEV695_3138Not AvailableNegative3462131 - 346285027332.8
fur family zinc uptake transcriptional regulatorEV695_3139Not AvailableNegative3463159 - 346361716961.5
uncharacterized protein duf2796EV695_3140Not AvailablePositive3463790 - 346446425363.1
putative abc transport system atp-binding proteinEV695_3141Not AvailablePositive3464464 - 346518626658.7
putative abc transport system permease proteinEV695_3142Not AvailablePositive3465189 - 346644545964.0

Displaying genes 3111 – 3120 of 4033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.