Cocleimonas flava strain DSM 24830

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Cocleimonas

Description

Cocleimonas flava strain DSM 24830 is a Gram-negative, aerobic, rod-shaped bacterium. It is characterized by its mesophilic nature, with an optimal growth temperature of 25°C, indicating that it thrives in moderate temperature conditions. This strain exhibits non-motile behavior, suggesting that it does not possess flagella or other structures for active movement. Cocleimonas flava is notable for having a single replicon, which is a defining feature of its genetic organization. The strain is cataloged under the sequence accession number SMFQ00000000.1, which provides a reference point for genetic studies and further characterization. Biologically, the aerobic nature of Cocleimonas flava suggests that it plays a role in environments where oxygen is available, potentially participating in processes such as organic matter decomposition or nutrient cycling in its ecological niche. The mesophilic temperature range aligns with conditions commonly found in terrestrial environments, which may influence its interactions with other microorganisms and its overall ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusCocleimonas
SpeciesCocleimonas flava
Strainstrain DSM 24830

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
Habitatbrood pouch
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cocleimonas flava strain DSM 24830 Ga0310460_109, whole genome

Gene Summary

Adenine Count

1348133 bp

Thymine Count

1321014 bp

Guanine Count

871896 bp

Cytosine Count

950339 bp

Genome Length

4491576 bp

Protein-coding Genes

3988 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-carboxymethyl-2-hydroxymuconate isomeraseEV695_1548Not AvailableNegative1709945 - 171028913121.9
pat family beta-lactamase induction signal transducer ampgEV695_1549Not AvailablePositive1710461 - 171176548937.6
amino acid abc transporter substrate-binding protein (paat family)EV695_1550Not AvailableNegative1711807 - 171260430222.4
glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii)EV695_1551Not AvailableNegative1712721 - 171366834513.8
glutamyl-trna synthetaseEV695_1552Not AvailableNegative1713895 - 171534054716.2
hypothetical proteinEV695_1553Not AvailablePositive1715625 - 171657233867.3
duf3047 family proteinEV695_1554Not AvailableNegative1716671 - 171733924258.8
pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (e3) componentEV695_1555Not AvailablePositive1717495 - 171962778218.4
sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily)EV695_1556Not AvailablePositive1719631 - 172041329865.1
2-hydroxychromene-2-carboxylate isomeraseEV695_1557Not AvailablePositive1720602 - 172123124282.2

Displaying genes 1541 – 1550 of 4033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.