Pantoea allii strain AF015A5 SAMN11029898.819

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea allii strain AF015A5 (accession SMFI00000000.1) is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates motility. This strain is classified as a facultative aerobe/anaerobe, allowing it to thrive in environments with varying oxygen levels. Pantoea allii strain AF015A5 is isolated from a dust habitat, indicating its adaptation to airborne environments and potential involvement in the microbial dynamics of dust particles. The bacterium does not form spores, which suggests a reliance on other survival strategies under adverse conditions rather than sporulation. With a single replicon, Pantoea allii strain AF015A5 displays a streamlined genomic architecture, which may contribute to its metabolic versatility. The ecological presence of this strain in dust highlights its potential role in nutrient cycling and interactions with other microbial communities in terrestrial ecosystems. Overall, Pantoea allii strain AF015A5 exemplifies the diversity of microbial life found in dust habitats, showcasing its adaptability and potential contributions to both local and broader ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea allii
Strainstrain AF015A5 SAMN11029898.819

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Pantoea allii strain AF015A5 SAMN11029898.819
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdust
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea allii strain AF015A5 SAMN11029898.819, whole genome

Gene Summary

Adenine Count

1038788 bp

Thymine Count

1040131 bp

Guanine Count

1246152 bp

Cytosine Count

1244444 bp

Genome Length

4569679 bp

Protein-coding Genes

4533 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iii subunit alphaE1N66_04570Not AvailableNegative916721 - 920203129952.0
ribonuclease hiiE1N66_04575Not AvailableNegative920235 - 92086122588.5
lipid-a-disaccharide synthaseE1N66_04580Not AvailableNegative920854 - 92200242554.1
acyl-acp--udp-n-acetylglucosamine o-acyltransferaseE1N66_04585Not AvailableNegative922006 - 92279428457.1
3-hydroxyacyl-acp dehydratase fabzE1N66_04590Not AvailableNegative922798 - 92325317107.1
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseE1N66_04595Not AvailableNegative923406 - 92443135940.4
molecular chaperone skpE1N66_04600Not AvailableNegative924435 - 92493218290.9
outer membrane protein assembly factor bamaE1N66_04605Not AvailableNegative925043 - 92699572161.0
trna(met) cytidine acetyltransferaseE1N66_04610Not AvailableNegative926996 - 92820244577.4
neutral zinc metallopeptidaseE1N66_04615Not AvailableNegative928202 - 92906831592.2

Displaying genes 921 – 930 of 4637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.