Pantoea allii strain AF015A5 SAMN11029898.819

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea allii strain AF015A5 (accession SMFI00000000.1) is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates motility. This strain is classified as a facultative aerobe/anaerobe, allowing it to thrive in environments with varying oxygen levels. Pantoea allii strain AF015A5 is isolated from a dust habitat, indicating its adaptation to airborne environments and potential involvement in the microbial dynamics of dust particles. The bacterium does not form spores, which suggests a reliance on other survival strategies under adverse conditions rather than sporulation. With a single replicon, Pantoea allii strain AF015A5 displays a streamlined genomic architecture, which may contribute to its metabolic versatility. The ecological presence of this strain in dust highlights its potential role in nutrient cycling and interactions with other microbial communities in terrestrial ecosystems. Overall, Pantoea allii strain AF015A5 exemplifies the diversity of microbial life found in dust habitats, showcasing its adaptability and potential contributions to both local and broader ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea allii
Strainstrain AF015A5 SAMN11029898.819

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Pantoea allii strain AF015A5 SAMN11029898.819
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdust
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea allii strain AF015A5 SAMN11029898.819, whole genome

Gene Summary

Adenine Count

1038788 bp

Thymine Count

1040131 bp

Guanine Count

1246152 bp

Cytosine Count

1244444 bp

Genome Length

4569679 bp

Protein-coding Genes

4533 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide n-acetylmannosaminouronosyltransferaseE1N66_00125Not AvailableNegative22803 - 2354327906.0
o-antigen assembly polymeraseE1N66_00130Not AvailableNegative23569 - 2491250934.6
tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferaseE1N66_00135Not AvailableNegative24909 - 2597640148.5
lipid iii flippase wzxeE1N66_00140Not AvailableNegative25973 - 2722345441.9
5s ribosomal rnaNot AvailableNot AvailablePositive27294 - 27409Not Available
Ncrna_class:otherNot AvailableNot AvailablePositive27654 - 27781Not Available
dtdp-4-amino-4,6-dideoxygalactose transaminaseE1N66_00145Not AvailableNegative27223 - 2835342241.6
dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferaseE1N66_00150Not AvailableNegative28340 - 2904725911.8
glucose-1-phosphate thymidylyltransferaseE1N66_00155Not AvailableNegative29025 - 2990632919.5
dtdp-glucose 4,6-dehydrataseE1N66_00160Not AvailableNegative29926 - 3099639701.7

Displaying genes 71 – 80 of 4637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.