Pantoea allii strain AF015A5 SAMN11029898.819

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea allii strain AF015A5 (accession SMFI00000000.1) is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates motility. This strain is classified as a facultative aerobe/anaerobe, allowing it to thrive in environments with varying oxygen levels. Pantoea allii strain AF015A5 is isolated from a dust habitat, indicating its adaptation to airborne environments and potential involvement in the microbial dynamics of dust particles. The bacterium does not form spores, which suggests a reliance on other survival strategies under adverse conditions rather than sporulation. With a single replicon, Pantoea allii strain AF015A5 displays a streamlined genomic architecture, which may contribute to its metabolic versatility. The ecological presence of this strain in dust highlights its potential role in nutrient cycling and interactions with other microbial communities in terrestrial ecosystems. Overall, Pantoea allii strain AF015A5 exemplifies the diversity of microbial life found in dust habitats, showcasing its adaptability and potential contributions to both local and broader ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea allii
Strainstrain AF015A5 SAMN11029898.819

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Pantoea allii strain AF015A5 SAMN11029898.819
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdust
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea allii strain AF015A5 SAMN11029898.819, whole genome

Gene Summary

Adenine Count

1038788 bp

Thymine Count

1040131 bp

Guanine Count

1246152 bp

Cytosine Count

1244444 bp

Genome Length

4569679 bp

Protein-coding Genes

4533 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar basal body rod protein flgbE1N66_19245Not AvailableNegative3817042 - 381745515001.7
flagellar basal body p-ring formation protein flgaE1N66_19250Not AvailablePositive3817610 - 381799514228.1
pyridoxal-dependent decarboxylaseE1N66_19255Not AvailablePositive3819320 - 382088256818.5
alcaligin biosynthesis proteinE1N66_19260Not AvailablePositive3820884 - 382136718643.2
sodium:proline symporterE1N66_19265Not AvailablePositive3821368 - 382241037373.3
ftr1 family proteinE1N66_19270Not AvailablePositive3822601 - 382342530065.4
iron uptake system protein efeoE1N66_19275Not AvailablePositive3823480 - 382459540503.5
deferrochelatase/peroxidase efebE1N66_19280Not AvailablePositive3824598 - 38247896663.86
glucose-6-phosphate dehydrogenaseE1N66_19285Not AvailablePositive3824967 - 382644255798.5
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseE1N66_19290Not AvailablePositive3826658 - 382729622388.4

Displaying genes 3711 – 3720 of 4637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.