Pantoea allii strain AF015A5 SAMN11029898.819

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea allii strain AF015A5 (accession SMFI00000000.1) is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates motility. This strain is classified as a facultative aerobe/anaerobe, allowing it to thrive in environments with varying oxygen levels. Pantoea allii strain AF015A5 is isolated from a dust habitat, indicating its adaptation to airborne environments and potential involvement in the microbial dynamics of dust particles. The bacterium does not form spores, which suggests a reliance on other survival strategies under adverse conditions rather than sporulation. With a single replicon, Pantoea allii strain AF015A5 displays a streamlined genomic architecture, which may contribute to its metabolic versatility. The ecological presence of this strain in dust highlights its potential role in nutrient cycling and interactions with other microbial communities in terrestrial ecosystems. Overall, Pantoea allii strain AF015A5 exemplifies the diversity of microbial life found in dust habitats, showcasing its adaptability and potential contributions to both local and broader ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea allii
Strainstrain AF015A5 SAMN11029898.819

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Pantoea allii strain AF015A5 SAMN11029898.819
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdust
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea allii strain AF015A5 SAMN11029898.819, whole genome

Gene Summary

Adenine Count

1038788 bp

Thymine Count

1040131 bp

Guanine Count

1246152 bp

Cytosine Count

1244444 bp

Genome Length

4569679 bp

Protein-coding Genes

4533 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system lipoprotein tssjE1N66_14760Not AvailablePositive3003935 - 300443218408.2
type vi secretion system baseplate subunit tsskE1N66_14765Not AvailablePositive3004438 - 300577850142.9
dotu family type vi secretion system proteinE1N66_14770Not AvailablePositive3005796 - 300703445520.9
Trna-glnNot AvailableNot AvailablePositive3007263 - 3007337Not Available
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylaseE1N66_14780Not AvailableNegative3007450 - 300862242885.5
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabE1N66_14785Not AvailablePositive3008795 - 301021953538.3
phoh family proteinE1N66_14790Not AvailablePositive3010429 - 301149039790.9
rrna maturation rnase ybeyE1N66_14795Not AvailablePositive3011487 - 301196017653.6
magnesium/cobalt transporter corcE1N66_14800Not AvailablePositive3012043 - 301292433461.6
apolipoprotein n-acyltransferaseE1N66_14805Not AvailablePositive3012929 - 301353021627.1

Displaying genes 2861 – 2870 of 4637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.