Pantoea allii strain AF015A5 SAMN11029898.819

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea allii strain AF015A5 (accession SMFI00000000.1) is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates motility. This strain is classified as a facultative aerobe/anaerobe, allowing it to thrive in environments with varying oxygen levels. Pantoea allii strain AF015A5 is isolated from a dust habitat, indicating its adaptation to airborne environments and potential involvement in the microbial dynamics of dust particles. The bacterium does not form spores, which suggests a reliance on other survival strategies under adverse conditions rather than sporulation. With a single replicon, Pantoea allii strain AF015A5 displays a streamlined genomic architecture, which may contribute to its metabolic versatility. The ecological presence of this strain in dust highlights its potential role in nutrient cycling and interactions with other microbial communities in terrestrial ecosystems. Overall, Pantoea allii strain AF015A5 exemplifies the diversity of microbial life found in dust habitats, showcasing its adaptability and potential contributions to both local and broader ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea allii
Strainstrain AF015A5 SAMN11029898.819

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Pantoea allii strain AF015A5 SAMN11029898.819
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdust
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea allii strain AF015A5 SAMN11029898.819, whole genome

Gene Summary

Adenine Count

1038788 bp

Thymine Count

1040131 bp

Guanine Count

1246152 bp

Cytosine Count

1244444 bp

Genome Length

4569679 bp

Protein-coding Genes

4533 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenine-specific dna-methyltransferaseE1N66_05725Not AvailableNegative1169096 - 116991131160.1
stress response protein elabE1N66_05735Not AvailablePositive1172205 - 117251611377.3
nicotinamide mononucleotide deamidase-related protein yfayE1N66_05740Not AvailablePositive1172759 - 117395543613.6
2fe-2s ferredoxin-like proteinE1N66_05745Not AvailableNegative1174096 - 11743569793.98
ribonucleotide-diphosphate reductase subunit betaE1N66_05750Not AvailableNegative1174359 - 117548943569.8
ribonucleoside-diphosphate reductase subunit alphaE1N66_05755Not AvailableNegative1175562 - 117784786019.2
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigE1N66_05760Not AvailableNegative1178354 - 117907926850.2
dna topoisomerase (atp-hydrolyzing) subunit aE1N66_05765Not AvailablePositive1179257 - 118192998774.0
two-component system sensor histidine kinase rcscE1N66_05770Not AvailablePositive1182388 - 1185240107271.0
transcriptional regulator rcsbE1N66_05775Not AvailableNegative1185294 - 118594423754.9

Displaying genes 1141 – 1150 of 4637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.