Dietzia cinnamea strain 55

Gram-positiveAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Dietziaceae

Genus

Dietzia

Description

Dietzia cinnamea strain 55 is a Gram-positive bacterium that demonstrates aerobic respiration, requiring oxygen for its metabolic processes. This organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The strain has been designated with the accession number SMCX00000000.1, which serves as a reference for its genomic data and facilitates further research into its characteristics and applications. Understanding the genetic makeup and traits of Dietzia cinnamea strain 55 can provide insights into its ecological role, particularly in environments where oxygen is present. As an aerobic organism, Dietzia cinnamea strain 55 likely plays a significant role in nutrient cycling and the degradation of organic matter in oxygen-rich environments. Its Gram-positive nature may also suggest the presence of a robust cell wall, which can be advantageous for survival in diverse ecological niches. The combination of these traits positions Dietzia cinnamea strain 55 as a potentially important player in microbial communities, particularly in environments where aerobic conditions prevail. Further studies on this strain could reveal more about its functional capabilities and contributions to ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyDietziaceae
GenusDietzia
SpeciesDietzia cinnamea
Strainstrain 55

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dietzia cinnamea strain 55 Ga0193691_180, whole genome shotgun

Gene Summary

Adenine Count

513370 bp

Thymine Count

515508 bp

Guanine Count

1258699 bp

Cytosine Count

1261840 bp

Genome Length

3549427 bp

Protein-coding Genes

3289 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cubico group peptidase (beta-lactamase class c family)EDD19_10160Not AvailablePositive63926 - 6526647968.3
dgtpaseEDD19_10161Not AvailableNegative65329 - 6659145553.6
uncharacterized sam-binding protein ycdf (duf218 family)EDD19_10162Not AvailableNegative66642 - 6725922111.4
glycyl-trna synthetaseEDD19_10163Not AvailableNegative67315 - 6879656152.1
arsr family transcriptional regulatorEDD19_10164Not AvailablePositive68900 - 6926813032.8
fur family zinc uptake regulatorEDD19_10165Not AvailablePositive69273 - 6970115495.2
undecaprenyl pyrophosphate synthetaseEDD19_10166Not AvailableNegative69891 - 7070330560.3
dna replication and repair protein recoEDD19_10167Not AvailableNegative70678 - 7158331662.0
gtp-binding protein eraEDD19_10168Not AvailableNegative71707 - 7261533060.9
cbs domain containing-hemolysin-like proteinEDD19_10169Not AvailableNegative72612 - 7393747284.5

Displaying genes 61 – 70 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

275 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001593L-xylo-hex-3-ulonolactoneC6H8O6Chemical structure of L-xylo-hex-3-ulonolactoneNot available
Average176.1241Da
Monoisotopic176.032087988Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0002197D-arabinoseC5H10O5Chemical structure of D-arabinoseNot available
Average150.1299Da
Monoisotopic150.05282343Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da

Displaying 1–10 of 275 metabolites

Health Effects

No health effects information available for this bacterium.