Luteibacter rhizovicinus strain LP_13_YM

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Luteibacter

Description

Luteibacter rhizovicinus strain LP_13_YM is a Gram-negative bacterium characterized by a single replicon. This strain is notably isolated from steak tartare, indicating its presence in a specific food habitat that is often associated with raw meat consumption. The unique environment of steak tartare may influence the bacterium's metabolic activities and interactions with other microorganisms present in the dish. The accession number for Luteibacter rhizovicinus strain LP_13_YM is SMCS00000000.1, which provides a reference for further genetic and genomic studies. The singular replicon suggests a streamlined genetic architecture that could facilitate adaptability in its niche environment. The presence of Luteibacter rhizovicinus in steak tartare emphasizes the importance of studying such microorganisms in food safety and microbiology, particularly in raw or minimally processed food products. Understanding the role of this bacterium in the food matrix may provide insights into its potential contributions to flavor development, spoilage, or even health implications associated with the consumption of raw meat. Additionally, it highlights the intricate relationships between microbial communities in food environments, warranting further research into its ecological role and interactions with other microbial species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusLuteibacter
SpeciesLuteibacter rhizovicinus
Strainstrain LP_13_YM

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsteak tartare
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Luteibacter rhizovicinus strain LP_13_YM Ga0304825_122, whole

Gene Summary

Adenine Count

828838 bp

Thymine Count

824950 bp

Guanine Count

1408430 bp

Cytosine Count

1409105 bp

Genome Length

4471323 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein sco1/2EC912_11238Not AvailableNegative4357105 - 435772222499.9
uncharacterized membrane protein ygdd (tmem256/duf423 family)EC912_11239Not AvailablePositive4357803 - 435818012601.7
spfh domain/band 7 family proteinEC912_11240Not AvailableNegative4358454 - 435932031365.9
transglutaminase superfamily proteinEC912_11241Not AvailableNegative4359404 - 436089454244.9
formate-dependent phosphoribosylglycinamide formyltransferaseEC912_11242Not AvailablePositive4361021 - 436220242789.3
glutamate synthase domain-containing protein 2EC912_11243Not AvailablePositive4362271 - 436377954817.5
hypothetical proteinEC912_11244Not AvailablePositive4363894 - 436559459428.2
nucleoside-diphosphate-sugar epimeraseEC912_11245Not AvailablePositive4365601 - 436645830408.9
penicillin-binding protein 1bEC912_11246Not AvailablePositive4366535 - 436886284413.0
hypothetical proteinEC912_11247Not AvailablePositive4368865 - 436937718489.1

Displaying genes 3811 – 3820 of 3907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.