Luteibacter rhizovicinus strain LP_13_YM

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Luteibacter

Description

Luteibacter rhizovicinus strain LP_13_YM is a Gram-negative bacterium characterized by a single replicon. This strain is notably isolated from steak tartare, indicating its presence in a specific food habitat that is often associated with raw meat consumption. The unique environment of steak tartare may influence the bacterium's metabolic activities and interactions with other microorganisms present in the dish. The accession number for Luteibacter rhizovicinus strain LP_13_YM is SMCS00000000.1, which provides a reference for further genetic and genomic studies. The singular replicon suggests a streamlined genetic architecture that could facilitate adaptability in its niche environment. The presence of Luteibacter rhizovicinus in steak tartare emphasizes the importance of studying such microorganisms in food safety and microbiology, particularly in raw or minimally processed food products. Understanding the role of this bacterium in the food matrix may provide insights into its potential contributions to flavor development, spoilage, or even health implications associated with the consumption of raw meat. Additionally, it highlights the intricate relationships between microbial communities in food environments, warranting further research into its ecological role and interactions with other microbial species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusLuteibacter
SpeciesLuteibacter rhizovicinus
Strainstrain LP_13_YM

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsteak tartare
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Luteibacter rhizovicinus strain LP_13_YM Ga0304825_122, whole

Gene Summary

Adenine Count

828838 bp

Thymine Count

824950 bp

Guanine Count

1408430 bp

Cytosine Count

1409105 bp

Genome Length

4471323 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucose-6-phosphate 1-dehydrogenaseEC912_106120Not AvailableNegative3454097 - 345556953907.2
gntr family transcriptional regulatorEC912_106121Not AvailablePositive3455817 - 345656927953.7
glutamine--fructose-6-phosphate transaminaseEC912_106122Not AvailablePositive3456583 - 345761736467.6
n-acetylglucosamine 6-phosphate deacetylaseEC912_106123Not AvailablePositive3457631 - 345877039949.7
tonb-dependent receptor-like proteinEC912_106124Not AvailableNegative3459313 - 3462312108766.0
vitamin b12 transporterEC912_106126Not AvailablePositive3463005 - 346487067712.9
multidrug efflux pumpEC912_106127Not AvailablePositive3465234 - 3468425114388.0
putative mate family efflux proteinEC912_106128Not AvailableNegative3468428 - 346987951715.6
hypothetical proteinEC912_106129Not AvailableNegative3469897 - 347047220983.9
pas domain s-box-containing protein/diguanylate cyclase (ggdef)-like proteinEC912_106130Not AvailableNegative3470583 - 3473564108102.0

Displaying genes 3041 – 3050 of 3907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.