Luteibacter rhizovicinus strain LP_13_YM

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Luteibacter

Description

Luteibacter rhizovicinus strain LP_13_YM is a Gram-negative bacterium characterized by a single replicon. This strain is notably isolated from steak tartare, indicating its presence in a specific food habitat that is often associated with raw meat consumption. The unique environment of steak tartare may influence the bacterium's metabolic activities and interactions with other microorganisms present in the dish. The accession number for Luteibacter rhizovicinus strain LP_13_YM is SMCS00000000.1, which provides a reference for further genetic and genomic studies. The singular replicon suggests a streamlined genetic architecture that could facilitate adaptability in its niche environment. The presence of Luteibacter rhizovicinus in steak tartare emphasizes the importance of studying such microorganisms in food safety and microbiology, particularly in raw or minimally processed food products. Understanding the role of this bacterium in the food matrix may provide insights into its potential contributions to flavor development, spoilage, or even health implications associated with the consumption of raw meat. Additionally, it highlights the intricate relationships between microbial communities in food environments, warranting further research into its ecological role and interactions with other microbial species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusLuteibacter
SpeciesLuteibacter rhizovicinus
Strainstrain LP_13_YM

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsteak tartare
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Luteibacter rhizovicinus strain LP_13_YM Ga0304825_122, whole

Gene Summary

Adenine Count

828838 bp

Thymine Count

824950 bp

Guanine Count

1408430 bp

Cytosine Count

1409105 bp

Genome Length

4471323 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pts system ascorbate-specific iia componentEC912_104271Not AvailableNegative2797265 - 279765713602.7
upf0042 nucleotide-binding proteinEC912_104272Not AvailableNegative2797697 - 279859333455.1
hpr(ser) kinase/phosphataseEC912_104273Not AvailableNegative2798601 - 279955135377.0
putative sigma-54 modulation proteinEC912_104274Not AvailableNegative2799694 - 280001411780.2
rna polymerase rpon-/sigl-like sigma 54 subunitEC912_104275Not AvailableNegative2800138 - 280161054299.5
lipopolysaccharide export system atp-binding proteinEC912_104276Not AvailableNegative2801759 - 280247826614.3
lipopolysaccharide export system protein lptaEC912_104277Not AvailableNegative2802481 - 280310121106.8
lipopolysaccharide export system protein lptcEC912_104278Not AvailableNegative2803064 - 280366922352.6
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)EC912_104279Not AvailableNegative2803666 - 280421419868.8
arabinose-5-phosphate isomeraseEC912_104280Not AvailableNegative2804285 - 280529835145.7

Displaying genes 2481 – 2490 of 3907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.