Biostraticola tofi strain DSM 19580

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Bruguierivoracaceae

Genus

Biostraticola

Description

Biostraticola tofi strain DSM 19580 is characterized by a single replicon, indicating that its genomic structure consists of one circular chromosome. This trait may suggest a streamlined genetic organization typical of certain prokaryotic organisms, which can facilitate efficient replication and gene regulation. The strain is cataloged under the accession number SMCR00000000.1, providing a reference for researchers seeking to access its genomic data. This accession number is crucial for scientific communication, allowing for the verification and examination of the genomic features associated with Biostraticola tofi. Understanding the genetic framework of Biostraticola tofi can offer insights into its ecological roles. As a member of the microbial community, the strain may contribute to various biogeochemical processes, potentially influencing nutrient cycling and organic matter decomposition in its environment. The functional capabilities inferred from its genomic content could be explored further to assess its interactions within its ecosystem, though specific functional traits remain unspecified in the current data. Overall, the genetic simplicity indicated by the presence of a single replicon in Biostraticola tofi strain DSM 19580 poses interesting questions about its adaptability and ecological significance, warranting further investigation into its environmental interactions and contributions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyBruguierivoracaceae
GenusBiostraticola
SpeciesBiostraticola tofi
Strainstrain DSM 19580

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Biostraticola tofi strain DSM 19580 Ga0244679_132, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3858 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate-5-semialdehyde dehydrogenaseEDC52_11621Not AvailablePositive4154901 - 415615444712.6
2-keto-3-deoxygluconate permeaseEDC52_11622Not AvailableNegative4156231 - 415721134130.4
hypothetical proteinEDC52_11623Not AvailablePositive4157477 - 41577258792.32
Trna-thrNot AvailableNot AvailablePositive4158188 - 4158263Not Available
crispr-associated csy4 family proteinEDC52_11625Not AvailableNegative4158555 - 415910920737.1
crispr-associated csy3 family proteinEDC52_11626Not AvailableNegative4159119 - 416012937180.9
crispr-associated csy2 family proteinEDC52_11627Not AvailableNegative4160140 - 416107235056.6
crispr-associated csy1 family proteinEDC52_11628Not AvailableNegative4161069 - 416240951316.3
crispr-associated cas3 family helicaseEDC52_11629Not AvailableNegative4162427 - 4165717124785.0
crispr-associated cas1 family proteinEDC52_11630Not AvailableNegative4165714 - 416669436227.4

Displaying genes 3841 – 3850 of 4009 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.