Biostraticola tofi strain DSM 19580

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Bruguierivoracaceae

Genus

Biostraticola

Description

Biostraticola tofi strain DSM 19580 is characterized by a single replicon, indicating that its genomic structure consists of one circular chromosome. This trait may suggest a streamlined genetic organization typical of certain prokaryotic organisms, which can facilitate efficient replication and gene regulation. The strain is cataloged under the accession number SMCR00000000.1, providing a reference for researchers seeking to access its genomic data. This accession number is crucial for scientific communication, allowing for the verification and examination of the genomic features associated with Biostraticola tofi. Understanding the genetic framework of Biostraticola tofi can offer insights into its ecological roles. As a member of the microbial community, the strain may contribute to various biogeochemical processes, potentially influencing nutrient cycling and organic matter decomposition in its environment. The functional capabilities inferred from its genomic content could be explored further to assess its interactions within its ecosystem, though specific functional traits remain unspecified in the current data. Overall, the genetic simplicity indicated by the presence of a single replicon in Biostraticola tofi strain DSM 19580 poses interesting questions about its adaptability and ecological significance, warranting further investigation into its environmental interactions and contributions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyBruguierivoracaceae
GenusBiostraticola
SpeciesBiostraticola tofi
Strainstrain DSM 19580

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Biostraticola tofi strain DSM 19580 Ga0244679_132, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3858 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-iminobutanoate/2-iminopropanoate deaminaseEDC52_11219Not AvailablePositive3834669 - 383505513829.6
putative circularly permuted atp-grasp superfamily proteinEDC52_11220Not AvailablePositive3835291 - 383672753669.1
putative alpha-e superfamily proteinEDC52_11221Not AvailablePositive3836721 - 383765035459.8
transglutaminase-like putative cysteine proteaseEDC52_11222Not AvailablePositive3837647 - 383846530388.9
putative proteasome-type proteaseEDC52_11223Not AvailablePositive3838489 - 383922927281.5
hypothetical proteinEDC52_11224Not AvailablePositive3839371 - 38395054736.53
trehalose-6-phosphate hydrolaseEDC52_11225Not AvailablePositive3839546 - 384122262981.4
oligogalacturonate-specific porin protein kdgmEDC52_11226Not AvailableNegative3841226 - 384194227078.9
ribonucleoside-triphosphate reductase class iii catalytic subunitEDC52_11227Not AvailablePositive3842459 - 384459779701.0
ribonucleoside-triphosphate reductase class iii activase subunitEDC52_11228Not AvailablePositive3844603 - 384508817889.4

Displaying genes 3561 – 3570 of 4009 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.