Biostraticola tofi strain DSM 19580

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Bruguierivoracaceae

Genus

Biostraticola

Description

Biostraticola tofi strain DSM 19580 is characterized by a single replicon, indicating that its genomic structure consists of one circular chromosome. This trait may suggest a streamlined genetic organization typical of certain prokaryotic organisms, which can facilitate efficient replication and gene regulation. The strain is cataloged under the accession number SMCR00000000.1, providing a reference for researchers seeking to access its genomic data. This accession number is crucial for scientific communication, allowing for the verification and examination of the genomic features associated with Biostraticola tofi. Understanding the genetic framework of Biostraticola tofi can offer insights into its ecological roles. As a member of the microbial community, the strain may contribute to various biogeochemical processes, potentially influencing nutrient cycling and organic matter decomposition in its environment. The functional capabilities inferred from its genomic content could be explored further to assess its interactions within its ecosystem, though specific functional traits remain unspecified in the current data. Overall, the genetic simplicity indicated by the presence of a single replicon in Biostraticola tofi strain DSM 19580 poses interesting questions about its adaptability and ecological significance, warranting further investigation into its environmental interactions and contributions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyBruguierivoracaceae
GenusBiostraticola
SpeciesBiostraticola tofi
Strainstrain DSM 19580

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Biostraticola tofi strain DSM 19580 Ga0244679_132, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3858 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-d-manno-octulosonic-acid transferaseEDC52_10960Not AvailablePositive3513883 - 351515147395.2
(heptosyl)lps beta-1,4-glucosyltransferaseEDC52_10961Not AvailablePositive3515152 - 351592829906.8
phosphopantetheine adenylyltransferaseEDC52_10962Not AvailablePositive3515928 - 351641017738.5
dna-(apurinic or apyrimidinic site) lyaseEDC52_10963Not AvailableNegative3516415 - 351726031543.3
lsu ribosomal protein l33pEDC52_10964Not AvailableNegative3517305 - 35174726357.91
lsu ribosomal protein l28pEDC52_10965Not AvailableNegative3517489 - 35177259039.09
dna replication and repair protein radcEDC52_10966Not AvailableNegative3517966 - 351864925732.4
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligaseEDC52_10967Not AvailablePositive3518831 - 352005443297.4
deoxyuridine 5'-triphosphate nucleotidohydrolaseEDC52_10968Not AvailablePositive3520023 - 352048116268.7
tetr family transcriptional regulator /cell division inhibitor slmaEDC52_10969Not AvailablePositive3520611 - 352121023166.2

Displaying genes 3261 – 3270 of 4009 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.