Biostraticola tofi strain DSM 19580

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Bruguierivoracaceae

Genus

Biostraticola

Description

Biostraticola tofi strain DSM 19580 is characterized by a single replicon, indicating that its genomic structure consists of one circular chromosome. This trait may suggest a streamlined genetic organization typical of certain prokaryotic organisms, which can facilitate efficient replication and gene regulation. The strain is cataloged under the accession number SMCR00000000.1, providing a reference for researchers seeking to access its genomic data. This accession number is crucial for scientific communication, allowing for the verification and examination of the genomic features associated with Biostraticola tofi. Understanding the genetic framework of Biostraticola tofi can offer insights into its ecological roles. As a member of the microbial community, the strain may contribute to various biogeochemical processes, potentially influencing nutrient cycling and organic matter decomposition in its environment. The functional capabilities inferred from its genomic content could be explored further to assess its interactions within its ecosystem, though specific functional traits remain unspecified in the current data. Overall, the genetic simplicity indicated by the presence of a single replicon in Biostraticola tofi strain DSM 19580 poses interesting questions about its adaptability and ecological significance, warranting further investigation into its environmental interactions and contributions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyBruguierivoracaceae
GenusBiostraticola
SpeciesBiostraticola tofi
Strainstrain DSM 19580

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Biostraticola tofi strain DSM 19580 Ga0244679_132, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3858 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribose-phosphate pyrophosphokinaseEDC52_10118Not AvailableNegative17583 - 1853034398.6
4-diphosphocytidyl-2-c-methyl-d-erythritol kinaseEDC52_10119Not AvailableNegative18682 - 1953931370.6
outer membrane lipoprotein lolbEDC52_10120Not AvailableNegative19539 - 2015923484.0
glutamyl-trna reductaseEDC52_10121Not AvailablePositive20383 - 2163946430.8
peptide chain release factor 1 (brf-1)EDC52_10122Not AvailablePositive21678 - 2276040437.8
[protein release factor]-glutamine n5-methyltransferaseEDC52_10123Not AvailablePositive22757 - 2359330144.0
putative membrane protein sirb2EDC52_10124Not AvailablePositive23559 - 2402017984.6
regulator of sirc expression with transglutaminase-like and tpr domainEDC52_10125Not AvailablePositive24017 - 2482630515.6
2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase)EDC52_10126Not AvailablePositive24883 - 2573730929.4
Ncrna_class:otherNot AvailableNot AvailablePositive24959 - 25018Not Available

Displaying genes 101 – 110 of 4009 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.