Methylomonas methanica strain S-1

Aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Methylococcales

Family

Methylococcaceae

Genus

Methylomonas

Description

Methylomonas methanica strain S-1 is a free-living, aerobic bacterium that thrives in marine soil environments. This strain is categorized as mesophilic, indicating that it grows optimally at moderate temperature ranges, which is typical for many microbial species inhabiting similar ecological niches. Methylomonas methanica strain S-1 has a single replicon, which implies a streamlined genomic organization that may facilitate efficient metabolic processes. This strain's habitat in marine soil suggests a specific ecological role, likely contributing to the carbon cycle by utilizing methane as a carbon source. Given its aerobic nature, Methylomonas methanica strain S-1 is expected to engage in processes that mitigate methane emissions, potentially influencing the greenhouse gas dynamics in its environment. The accession number for this strain is SMCN00000000.1, indicating its availability in microbial databases for further research and analysis. Understanding the metabolic capabilities and ecological functions of Methylomonas methanica strain S-1 can provide insights into the microbial management of methane in marine soil ecosystems, highlighting its potential role in both biogeochemical cycles and environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMethylococcales
FamilyMethylococcaceae
GenusMethylomonas
SpeciesMethylomonas methanica
Strainstrain S-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMarine-Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylomonas methanica strain S-1 Ga0299759_172, whole genome

Gene Summary

Adenine Count

1206801 bp

Thymine Count

1218906 bp

Guanine Count

1307824 bp

Cytosine Count

1282316 bp

Genome Length

5015946 bp

Protein-coding Genes

4632 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lsu ribosomal protein l30pEDE11_103130Not AvailablePositive942040 - 9422256903.75
lsu ribosomal protein l15pEDE11_103131Not AvailablePositive942225 - 94265915222.7
protein translocase subunit secy/sec61 alphaEDE11_103132Not AvailablePositive942873 - 94398540351.5
ssu ribosomal protein s4pEDE11_103133Not AvailablePositive944979 - 94559923534.4
dna-directed rna polymerase subunit alphaEDE11_103134Not AvailablePositive945623 - 94663337175.9
lsu ribosomal protein l17pEDE11_103135Not AvailablePositive946652 - 94703214512.7
g/u mismatch-specific uracil-dna glycosylaseEDE11_103136Not AvailableNegative947226 - 94774119178.2
glyceraldehyde 3-phosphate dehydrogenaseEDE11_103137Not AvailableNegative947777 - 94882338287.8
dna-nicking smr family endonucleaseEDE11_103138Not AvailableNegative949102 - 94966821303.8
5'-nucleotidase /3'-nucleotidase /exopolyphosphataseEDE11_103139Not AvailablePositive949733 - 95048826910.9

Displaying genes 891 – 900 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.