Methylomonas methanica strain S-1

Aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Methylococcales

Family

Methylococcaceae

Genus

Methylomonas

Description

Methylomonas methanica strain S-1 is a free-living, aerobic bacterium that thrives in marine soil environments. This strain is categorized as mesophilic, indicating that it grows optimally at moderate temperature ranges, which is typical for many microbial species inhabiting similar ecological niches. Methylomonas methanica strain S-1 has a single replicon, which implies a streamlined genomic organization that may facilitate efficient metabolic processes. This strain's habitat in marine soil suggests a specific ecological role, likely contributing to the carbon cycle by utilizing methane as a carbon source. Given its aerobic nature, Methylomonas methanica strain S-1 is expected to engage in processes that mitigate methane emissions, potentially influencing the greenhouse gas dynamics in its environment. The accession number for this strain is SMCN00000000.1, indicating its availability in microbial databases for further research and analysis. Understanding the metabolic capabilities and ecological functions of Methylomonas methanica strain S-1 can provide insights into the microbial management of methane in marine soil ecosystems, highlighting its potential role in both biogeochemical cycles and environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMethylococcales
FamilyMethylococcaceae
GenusMethylomonas
SpeciesMethylomonas methanica
Strainstrain S-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMarine-Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylomonas methanica strain S-1 Ga0299759_172, whole genome

Gene Summary

Adenine Count

1206801 bp

Thymine Count

1218906 bp

Guanine Count

1307824 bp

Cytosine Count

1282316 bp

Genome Length

5015946 bp

Protein-coding Genes

4632 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferaseEDE11_13332Not AvailablePositive4531304 - 453236837714.2
udp-n-acetylmuramate--l-alanine ligaseEDE11_13333Not AvailablePositive4532365 - 453379251305.7
udp-n-acetylmuramate dehydrogenaseEDE11_13334Not AvailablePositive4533792 - 453467031573.7
d-alanine--d-alanine ligaseEDE11_13335Not AvailablePositive4534667 - 453561733986.9
cell division protein ftsqEDE11_13336Not AvailablePositive4535604 - 453634728364.9
cell division protein ftsaEDE11_13337Not AvailablePositive4536368 - 453759443715.9
cell division protein ftszEDE11_13338Not AvailablePositive4537618 - 453877840566.8
udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylaseEDE11_13339Not AvailablePositive4538887 - 453981333975.6
uncharacterized protein duf721EDE11_13340Not AvailableNegative4539887 - 454034816657.5
putative flippase gtraEDE11_13341Not AvailablePositive4540525 - 454101318661.1

Displaying genes 4221 – 4230 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.