Methylomonas methanica strain S-1

Aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Methylococcales

Family

Methylococcaceae

Genus

Methylomonas

Description

Methylomonas methanica strain S-1 is a free-living, aerobic bacterium that thrives in marine soil environments. This strain is categorized as mesophilic, indicating that it grows optimally at moderate temperature ranges, which is typical for many microbial species inhabiting similar ecological niches. Methylomonas methanica strain S-1 has a single replicon, which implies a streamlined genomic organization that may facilitate efficient metabolic processes. This strain's habitat in marine soil suggests a specific ecological role, likely contributing to the carbon cycle by utilizing methane as a carbon source. Given its aerobic nature, Methylomonas methanica strain S-1 is expected to engage in processes that mitigate methane emissions, potentially influencing the greenhouse gas dynamics in its environment. The accession number for this strain is SMCN00000000.1, indicating its availability in microbial databases for further research and analysis. Understanding the metabolic capabilities and ecological functions of Methylomonas methanica strain S-1 can provide insights into the microbial management of methane in marine soil ecosystems, highlighting its potential role in both biogeochemical cycles and environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMethylococcales
FamilyMethylococcaceae
GenusMethylomonas
SpeciesMethylomonas methanica
Strainstrain S-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMarine-Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylomonas methanica strain S-1 Ga0299759_172, whole genome

Gene Summary

Adenine Count

1206801 bp

Thymine Count

1218906 bp

Guanine Count

1307824 bp

Cytosine Count

1282316 bp

Genome Length

5015946 bp

Protein-coding Genes

4632 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent hsluv protease atp-binding subunit hsluEDE11_10887Not AvailableNegative2319794 - 232111348853.8
hslv component of hsluv peptidaseEDE11_10888Not AvailableNegative2321118 - 232167820258.2
hypothetical proteinEDE11_10889Not AvailablePositive2321885 - 232233116271.5
trna(arg) a34 adenosine deaminase tadaEDE11_10890Not AvailableNegative2322325 - 232278916980.3
homoserine o-succinyltransferaseEDE11_10891Not AvailableNegative2322789 - 232385341004.6
shikimate kinaseEDE11_10892Not AvailableNegative2323867 - 232471532078.3
hypothetical proteinEDE11_10893Not AvailableNegative2324724 - 232502611337.5
slyx proteinEDE11_10894Not AvailablePositive2325157 - 23253637865.32
d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6)EDE11_10895Not AvailableNegative2325372 - 232670048085.2
cation diffusion facilitator family transporterEDE11_10896Not AvailableNegative2326749 - 232765132308.4

Displaying genes 2141 – 2150 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.