Methylomonas methanica strain S-1

Aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Methylococcales

Family

Methylococcaceae

Genus

Methylomonas

Description

Methylomonas methanica strain S-1 is a free-living, aerobic bacterium that thrives in marine soil environments. This strain is categorized as mesophilic, indicating that it grows optimally at moderate temperature ranges, which is typical for many microbial species inhabiting similar ecological niches. Methylomonas methanica strain S-1 has a single replicon, which implies a streamlined genomic organization that may facilitate efficient metabolic processes. This strain's habitat in marine soil suggests a specific ecological role, likely contributing to the carbon cycle by utilizing methane as a carbon source. Given its aerobic nature, Methylomonas methanica strain S-1 is expected to engage in processes that mitigate methane emissions, potentially influencing the greenhouse gas dynamics in its environment. The accession number for this strain is SMCN00000000.1, indicating its availability in microbial databases for further research and analysis. Understanding the metabolic capabilities and ecological functions of Methylomonas methanica strain S-1 can provide insights into the microbial management of methane in marine soil ecosystems, highlighting its potential role in both biogeochemical cycles and environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMethylococcales
FamilyMethylococcaceae
GenusMethylomonas
SpeciesMethylomonas methanica
Strainstrain S-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMarine-Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylomonas methanica strain S-1 Ga0299759_172, whole genome

Gene Summary

Adenine Count

1206801 bp

Thymine Count

1218906 bp

Guanine Count

1307824 bp

Cytosine Count

1282316 bp

Genome Length

5015946 bp

Protein-coding Genes

4632 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box-containing proteinEDE11_106207Not AvailableNegative1953526 - 1958985204770.0
putative two-component system response regulatorEDE11_106208Not AvailableNegative1959033 - 196017242532.1
5-methylthioadenosine/s-adenosylhomocysteine deaminaseEDE11_106209Not AvailablePositive1960272 - 196158547952.5
d-alanyl-lipoteichoic acid acyltransferase dltb (mboat superfamily)EDE11_106210Not AvailablePositive1961623 - 196316158334.1
hypothetical proteinEDE11_106211Not AvailablePositive1963161 - 196441747135.5
3-demethylubiquinone-9 3-methyltransferaseEDE11_106212Not AvailablePositive1964506 - 196521325692.8
phosphoglycolate phosphataseEDE11_106213Not AvailablePositive1965220 - 196589124425.4
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)EDE11_106214Not AvailablePositive1965882 - 196661025501.7
putative fes assembly suf system protein suftEDE11_106215Not AvailablePositive1966618 - 196716619683.5
diguanylate cyclase (ggdef)-like proteinEDE11_106216Not AvailablePositive1967324 - 196821133105.4

Displaying genes 1791 – 1800 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.