Methylomonas methanica strain S-1

Aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Methylococcales

Family

Methylococcaceae

Genus

Methylomonas

Description

Methylomonas methanica strain S-1 is a free-living, aerobic bacterium that thrives in marine soil environments. This strain is categorized as mesophilic, indicating that it grows optimally at moderate temperature ranges, which is typical for many microbial species inhabiting similar ecological niches. Methylomonas methanica strain S-1 has a single replicon, which implies a streamlined genomic organization that may facilitate efficient metabolic processes. This strain's habitat in marine soil suggests a specific ecological role, likely contributing to the carbon cycle by utilizing methane as a carbon source. Given its aerobic nature, Methylomonas methanica strain S-1 is expected to engage in processes that mitigate methane emissions, potentially influencing the greenhouse gas dynamics in its environment. The accession number for this strain is SMCN00000000.1, indicating its availability in microbial databases for further research and analysis. Understanding the metabolic capabilities and ecological functions of Methylomonas methanica strain S-1 can provide insights into the microbial management of methane in marine soil ecosystems, highlighting its potential role in both biogeochemical cycles and environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMethylococcales
FamilyMethylococcaceae
GenusMethylomonas
SpeciesMethylomonas methanica
Strainstrain S-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMarine-Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylomonas methanica strain S-1 Ga0299759_172, whole genome

Gene Summary

Adenine Count

1206801 bp

Thymine Count

1218906 bp

Guanine Count

1307824 bp

Cytosine Count

1282316 bp

Genome Length

5015946 bp

Protein-coding Genes

4632 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box-containing protein/diguanylate cyclase (ggdef)-like proteinEDE11_10532Not AvailablePositive1471066 - 147253854025.9
ctp synthaseEDE11_10533Not AvailablePositive1472667 - 147429560019.0
2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase)EDE11_10534Not AvailablePositive1474298 - 147513129924.3
enolaseEDE11_10535Not AvailablePositive1475141 - 147642445652.3
cell division protein ftsbEDE11_10536Not AvailablePositive1476483 - 147679712323.8
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseEDE11_10537Not AvailablePositive1476801 - 147749625321.3
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseEDE11_10538Not AvailablePositive1477493 - 147796616945.5
hypothetical proteinEDE11_10539Not AvailablePositive1478128 - 147842411098.7
trna pseudouridine13 synthaseEDE11_10540Not AvailablePositive1478581 - 147961838605.6
atp-binding cassette subfamily c protein lapbEDE11_10541Not AvailablePositive1479730 - 148188078107.7

Displaying genes 1361 – 1370 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.