Sphingobacterium alimentarium strain DSM 22362

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium alimentarium strain DSM 22362 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is non-motile and does not form spores, indicating a stable form of existence without the need for sporulation. It possesses a single replicon, which is an important trait for understanding its genetic structure and replication processes. The strain is cataloged under the accession number SMBZ00000000.1, which provides a reference for researchers seeking to explore its genomic and biochemical properties further. The aerobic nature of Sphingobacterium alimentarium implies that it requires oxygen for growth and metabolism, which is typical for members of the Sphingobacterium genus. From an ecological perspective, the presence of aerobic, non-motile Gram-negative bacteria like Sphingobacterium alimentarium in various environments may contribute to nutrient cycling and organic matter degradation. These traits suggest a role in the decomposition of organic materials in habitats such as soil or water, where they can interact with other microorganisms. Understanding the characteristics of this strain can provide insights into its potential applications in biotechnology or environmental microbiology, particularly in processes involving the breakdown of complex organic compounds.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium alimentarium
Strainstrain DSM 22362

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium alimentarium strain DSM 22362
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium alimentarium strain DSM 22362 Ga0244646_1107,

Gene Summary

Adenine Count

1101524 bp

Thymine Count

1094800 bp

Guanine Count

695672 bp

Cytosine Count

684798 bp

Genome Length

3576798 bp

Protein-coding Genes

3393 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent dna helicase recgEDC17_105612Not AvailableNegative3231309 - 323341480048.0
hypothetical proteinEDC17_105613Not AvailableNegative3233479 - 323414725719.8
2-iminobutanoate/2-iminopropanoate deaminaseEDC17_105614Not AvailableNegative3234317 - 323470314051.9
n-acetylglucosamine 6-phosphate deacetylaseEDC17_105615Not AvailablePositive3234900 - 323601240593.9
uncharacterized lipoprotein yddw (upf0748 family)EDC17_105616Not AvailablePositive3236091 - 323772262026.4
putative damage-inducible protein dinbEDC17_10572Not AvailablePositive3238058 - 323854618374.1
hypothetical proteinEDC17_10573Not AvailableNegative3238586 - 324044871503.9
rna polymerase sigma-70 factor (ecf subfamily)EDC17_10574Not AvailablePositive3240683 - 324118620107.3
hypothetical proteinEDC17_10575Not AvailablePositive3241164 - 324180824503.1
uncharacterized protein duf4252EDC17_10576Not AvailablePositive3241812 - 324229117940.1

Displaying genes 3131 – 3140 of 3497 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.