Thiobaca trueperi strain DSM 13587

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Thiobaca

Description

Thiobaca trueperi strain DSM 13587 is an anaerobic bacterium characterized by its singular replicon, which is a notable feature among microbial species. This strain is cataloged under the accession number SMAO00000000.1, providing a unique identifier for researchers seeking to study its genomic characteristics further. As an anaerobic organism, Thiobaca trueperi thrives in environments devoid of oxygen, which suggests its potential role in various biogeochemical processes, particularly in sulfur cycling. The anaerobic lifestyle of this bacterium implies it may be involved in the reduction of sulfate to sulfide, a critical process in many sediments and anoxic environments. Understanding the traits of Thiobaca trueperi can provide insights into its ecological niche, especially in habitats where oxygen is limited. Its ability to survive and perform metabolic functions in such conditions highlights the diversity of microbial life and its adaptability to various environmental stresses. This strain exemplifies the complex interactions within microbial communities, particularly in sulfur-rich ecosystems, where it may contribute to nutrient cycling and overall ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusThiobaca
SpeciesThiobaca trueperi
Strainstrain DSM 13587

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Thiobaca trueperi strain DSM 13587
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiobaca trueperi strain DSM 13587 Ga0244666_121, whole genome

Gene Summary

Adenine Count

763317 bp

Thymine Count

779233 bp

Guanine Count

1277609 bp

Cytosine Count

1253131 bp

Genome Length

4073386 bp

Protein-coding Genes

3590 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellinEDC35_102291Not AvailableNegative1065736 - 106656028418.7
lipopolysaccharide export system permease proteinEDC35_102292Not AvailableNegative1066654 - 106771838348.5
leucyl aminopeptidaseEDC35_102293Not AvailablePositive1067817 - 106932553188.5
putative nucleic acid-binding proteinEDC35_102294Not AvailableNegative1069370 - 106978015619.8
hypothetical proteinEDC35_102295Not AvailableNegative1069770 - 10699707802.37
hypothetical proteinEDC35_102296Not AvailableNegative1070186 - 107048510252.1
ph (pleckstrin homology) domain-containing proteinEDC35_102297Not AvailableNegative1070488 - 107097317663.1
putative dna-binding proteinEDC35_102298Not AvailablePositive1071134 - 107275059437.5
two-component system sensor histidine kinase phoqEDC35_102299Not AvailableNegative1072998 - 107440750785.5
l,d-transpeptidase-like proteinEDC35_102300Not AvailableNegative1074407 - 107500622550.2

Displaying genes 941 – 950 of 3641 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.