Thiobaca trueperi strain DSM 13587

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Thiobaca

Description

Thiobaca trueperi strain DSM 13587 is an anaerobic bacterium characterized by its singular replicon, which is a notable feature among microbial species. This strain is cataloged under the accession number SMAO00000000.1, providing a unique identifier for researchers seeking to study its genomic characteristics further. As an anaerobic organism, Thiobaca trueperi thrives in environments devoid of oxygen, which suggests its potential role in various biogeochemical processes, particularly in sulfur cycling. The anaerobic lifestyle of this bacterium implies it may be involved in the reduction of sulfate to sulfide, a critical process in many sediments and anoxic environments. Understanding the traits of Thiobaca trueperi can provide insights into its ecological niche, especially in habitats where oxygen is limited. Its ability to survive and perform metabolic functions in such conditions highlights the diversity of microbial life and its adaptability to various environmental stresses. This strain exemplifies the complex interactions within microbial communities, particularly in sulfur-rich ecosystems, where it may contribute to nutrient cycling and overall ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusThiobaca
SpeciesThiobaca trueperi
Strainstrain DSM 13587

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Thiobaca trueperi strain DSM 13587
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiobaca trueperi strain DSM 13587 Ga0244666_121, whole genome

Gene Summary

Adenine Count

763317 bp

Thymine Count

779233 bp

Guanine Count

1277609 bp

Cytosine Count

1253131 bp

Genome Length

4073386 bp

Protein-coding Genes

3590 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
[nife] hydrogenase diaphorase moiety large subunitEDC35_11012Not AvailablePositive3627556 - 362925962167.1
nad(p)-dependent iron-only hydrogenase catalytic subunitEDC35_11013Not AvailablePositive3629283 - 363118469553.7
ketopantoate reductaseEDC35_11014Not AvailablePositive3631254 - 363218633616.7
hd-like signal output (hdod) proteinEDC35_11015Not AvailablePositive3632381 - 363322931670.2
hd-like signal output (hdod) proteinEDC35_11016Not AvailablePositive3633304 - 363432037553.9
gntr family transcriptional regulatorEDC35_11017Not AvailablePositive3634610 - 363532627001.2
methylisocitrate lyaseEDC35_11018Not AvailablePositive3635373 - 363626331988.2
2-methylcitrate synthaseEDC35_11019Not AvailablePositive3636494 - 363764842780.0
damx proteinEDC35_11020Not AvailablePositive3637872 - 363908943205.6
hypothetical proteinEDC35_11021Not AvailablePositive3639221 - 363953812084.5

Displaying genes 3231 – 3240 of 3641 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.