Thiobaca trueperi strain DSM 13587

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Thiobaca

Description

Thiobaca trueperi strain DSM 13587 is an anaerobic bacterium characterized by its singular replicon, which is a notable feature among microbial species. This strain is cataloged under the accession number SMAO00000000.1, providing a unique identifier for researchers seeking to study its genomic characteristics further. As an anaerobic organism, Thiobaca trueperi thrives in environments devoid of oxygen, which suggests its potential role in various biogeochemical processes, particularly in sulfur cycling. The anaerobic lifestyle of this bacterium implies it may be involved in the reduction of sulfate to sulfide, a critical process in many sediments and anoxic environments. Understanding the traits of Thiobaca trueperi can provide insights into its ecological niche, especially in habitats where oxygen is limited. Its ability to survive and perform metabolic functions in such conditions highlights the diversity of microbial life and its adaptability to various environmental stresses. This strain exemplifies the complex interactions within microbial communities, particularly in sulfur-rich ecosystems, where it may contribute to nutrient cycling and overall ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusThiobaca
SpeciesThiobaca trueperi
Strainstrain DSM 13587

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Thiobaca trueperi strain DSM 13587
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiobaca trueperi strain DSM 13587 Ga0244666_121, whole genome

Gene Summary

Adenine Count

763317 bp

Thymine Count

779233 bp

Guanine Count

1277609 bp

Cytosine Count

1253131 bp

Genome Length

4073386 bp

Protein-coding Genes

3590 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hpr(ser) kinase/phosphataseEDC35_10353Not AvailableNegative1382171 - 138313335088.8
phosphotransferase iia-like nitrogen-regulatory protein ptsnEDC35_10354Not AvailableNegative1383150 - 138359916224.5
putative sigma-54 modulation proteinEDC35_10355Not AvailableNegative1383865 - 138419712420.7
rna polymerase rpon-/sigl-like sigma 54 subunitEDC35_10356Not AvailableNegative1384227 - 138571156021.1
lipopolysaccharide export system atp-binding proteinEDC35_10357Not AvailableNegative1385862 - 138658726498.3
lipopolysaccharide export system protein lptaEDC35_10358Not AvailableNegative1386584 - 138711419448.9
lipopolysaccharide export system protein lptcEDC35_10359Not AvailableNegative1387111 - 138771322599.8
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)EDC35_10360Not AvailableNegative1387710 - 138823119040.9
arabinose-5-phosphate isomeraseEDC35_10361Not AvailableNegative1388557 - 138957635285.2
adenine-specific dna methylaseEDC35_10362Not AvailableNegative1389684 - 1392953121549.0

Displaying genes 1221 – 1230 of 3641 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.