Thiobaca trueperi strain DSM 13587

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Thiobaca

Description

Thiobaca trueperi strain DSM 13587 is an anaerobic bacterium characterized by its singular replicon, which is a notable feature among microbial species. This strain is cataloged under the accession number SMAO00000000.1, providing a unique identifier for researchers seeking to study its genomic characteristics further. As an anaerobic organism, Thiobaca trueperi thrives in environments devoid of oxygen, which suggests its potential role in various biogeochemical processes, particularly in sulfur cycling. The anaerobic lifestyle of this bacterium implies it may be involved in the reduction of sulfate to sulfide, a critical process in many sediments and anoxic environments. Understanding the traits of Thiobaca trueperi can provide insights into its ecological niche, especially in habitats where oxygen is limited. Its ability to survive and perform metabolic functions in such conditions highlights the diversity of microbial life and its adaptability to various environmental stresses. This strain exemplifies the complex interactions within microbial communities, particularly in sulfur-rich ecosystems, where it may contribute to nutrient cycling and overall ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusThiobaca
SpeciesThiobaca trueperi
Strainstrain DSM 13587

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Thiobaca trueperi strain DSM 13587
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiobaca trueperi strain DSM 13587 Ga0244666_121, whole genome

Gene Summary

Adenine Count

763317 bp

Thymine Count

779233 bp

Guanine Count

1277609 bp

Cytosine Count

1253131 bp

Genome Length

4073386 bp

Protein-coding Genes

3590 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyltransferase family proteinEDC35_102480Not AvailablePositive1282852 - 128361928338.5
rnase hiEDC35_102481Not AvailablePositive1283612 - 128404016114.3
dna polymerase-3 subunit epsilonEDC35_102482Not AvailablePositive1284040 - 128475626450.6
crp/fnr family transcriptional regulatorEDC35_102483Not AvailableNegative1284868 - 128566829578.0
ctp synthaseEDC35_102484Not AvailablePositive1285866 - 128750960987.8
2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase)EDC35_102485Not AvailablePositive1287506 - 128833629399.4
methyl-accepting chemotaxis proteinEDC35_102486Not AvailablePositive1288590 - 129069576026.7
uncharacterized protein (tigr02001 family)EDC35_102487Not AvailablePositive1290700 - 129138324977.7
phospho-acceptor domain-containing proteinEDC35_102488Not AvailablePositive1291459 - 1294248102808.0
diguanylate cyclase (ggdef)-like proteinEDC35_102489Not AvailablePositive1294252 - 129646881952.0

Displaying genes 1131 – 1140 of 3641 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.