Thiobaca trueperi strain DSM 13587

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Thiobaca

Description

Thiobaca trueperi strain DSM 13587 is an anaerobic bacterium characterized by its singular replicon, which is a notable feature among microbial species. This strain is cataloged under the accession number SMAO00000000.1, providing a unique identifier for researchers seeking to study its genomic characteristics further. As an anaerobic organism, Thiobaca trueperi thrives in environments devoid of oxygen, which suggests its potential role in various biogeochemical processes, particularly in sulfur cycling. The anaerobic lifestyle of this bacterium implies it may be involved in the reduction of sulfate to sulfide, a critical process in many sediments and anoxic environments. Understanding the traits of Thiobaca trueperi can provide insights into its ecological niche, especially in habitats where oxygen is limited. Its ability to survive and perform metabolic functions in such conditions highlights the diversity of microbial life and its adaptability to various environmental stresses. This strain exemplifies the complex interactions within microbial communities, particularly in sulfur-rich ecosystems, where it may contribute to nutrient cycling and overall ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusThiobaca
SpeciesThiobaca trueperi
Strainstrain DSM 13587

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Thiobaca trueperi strain DSM 13587
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiobaca trueperi strain DSM 13587 Ga0244666_121, whole genome

Gene Summary

Adenine Count

763317 bp

Thymine Count

779233 bp

Guanine Count

1277609 bp

Cytosine Count

1253131 bp

Genome Length

4073386 bp

Protein-coding Genes

3590 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydrogenase maturation proteaseEDC35_102470Not AvailableNegative1274254 - 127478118769.5
nad(p)-dependent nickel-iron dehydrogenase catalytic subunitEDC35_102471Not AvailableNegative1274788 - 127621553221.2
hypothetical proteinEDC35_102472Not AvailableNegative1276220 - 127652511512.7
nad(p)-dependent nickel-iron dehydrogenase subunit hoxyEDC35_102473Not AvailableNegative1276563 - 127710519856.9
nad(p)-dependent nickel-iron dehydrogenase diaphorase component subunit hoxuEDC35_102474Not AvailableNegative1277102 - 127783327019.6
hypothetical proteinEDC35_102475Not AvailableNegative1277978 - 12781185177.37
nad(p)-dependent nickel-iron dehydrogenase flavin-containing subunitEDC35_102476Not AvailableNegative1278115 - 127971956826.7
nad(p)-dependent nickel-iron dehydrogenase diaphorase component subunit hoxeEDC35_102477Not AvailableNegative1279721 - 128021517672.5
cdp-diacylglycerol--serine o-phosphatidyltransferaseEDC35_102478Not AvailablePositive1280461 - 128122827519.7
membrane-bound lytic murein transglycosylase dEDC35_102479Not AvailableNegative1281225 - 128267352714.9

Displaying genes 1121 – 1130 of 3641 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.