Thiobaca trueperi strain DSM 13587

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Thiobaca

Description

Thiobaca trueperi strain DSM 13587 is an anaerobic bacterium characterized by its singular replicon, which is a notable feature among microbial species. This strain is cataloged under the accession number SMAO00000000.1, providing a unique identifier for researchers seeking to study its genomic characteristics further. As an anaerobic organism, Thiobaca trueperi thrives in environments devoid of oxygen, which suggests its potential role in various biogeochemical processes, particularly in sulfur cycling. The anaerobic lifestyle of this bacterium implies it may be involved in the reduction of sulfate to sulfide, a critical process in many sediments and anoxic environments. Understanding the traits of Thiobaca trueperi can provide insights into its ecological niche, especially in habitats where oxygen is limited. Its ability to survive and perform metabolic functions in such conditions highlights the diversity of microbial life and its adaptability to various environmental stresses. This strain exemplifies the complex interactions within microbial communities, particularly in sulfur-rich ecosystems, where it may contribute to nutrient cycling and overall ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusThiobaca
SpeciesThiobaca trueperi
Strainstrain DSM 13587

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Thiobaca trueperi strain DSM 13587
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiobaca trueperi strain DSM 13587 Ga0244666_121, whole genome

Gene Summary

Adenine Count

763317 bp

Thymine Count

779233 bp

Guanine Count

1277609 bp

Cytosine Count

1253131 bp

Genome Length

4073386 bp

Protein-coding Genes

3590 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-lysine 2,3-aminomutaseEDC35_102430Not AvailableNegative1226665 - 122799950782.8
hypothetical proteinEDC35_102431Not AvailableNegative1228320 - 122876016153.2
pyridoxamine 5'-phosphate oxidaseEDC35_102432Not AvailableNegative1228965 - 122960924496.1
isocitrate lyaseEDC35_102433Not AvailablePositive1230092 - 123139648166.8
regulator of ribonuclease activity aEDC35_102434Not AvailablePositive1231552 - 123203117077.4
isocitrate dehydrogenase kinase/phosphataseEDC35_102435Not AvailablePositive1232093 - 123385669199.3
7-cyano-7-deazaguanine reductaseEDC35_102436Not AvailableNegative1233915 - 123430414676.6
atp-dependent dna helicase recqEDC35_102437Not AvailableNegative1234636 - 123685882593.2
putative restriction endonucleaseEDC35_102438Not AvailablePositive1237095 - 123755016827.9
aconitate hydrataseEDC35_102439Not AvailablePositive1237643 - 124030695511.0

Displaying genes 1081 – 1090 of 3641 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.