Thiobaca trueperi strain DSM 13587

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Thiobaca

Description

Thiobaca trueperi strain DSM 13587 is an anaerobic bacterium characterized by its singular replicon, which is a notable feature among microbial species. This strain is cataloged under the accession number SMAO00000000.1, providing a unique identifier for researchers seeking to study its genomic characteristics further. As an anaerobic organism, Thiobaca trueperi thrives in environments devoid of oxygen, which suggests its potential role in various biogeochemical processes, particularly in sulfur cycling. The anaerobic lifestyle of this bacterium implies it may be involved in the reduction of sulfate to sulfide, a critical process in many sediments and anoxic environments. Understanding the traits of Thiobaca trueperi can provide insights into its ecological niche, especially in habitats where oxygen is limited. Its ability to survive and perform metabolic functions in such conditions highlights the diversity of microbial life and its adaptability to various environmental stresses. This strain exemplifies the complex interactions within microbial communities, particularly in sulfur-rich ecosystems, where it may contribute to nutrient cycling and overall ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusThiobaca
SpeciesThiobaca trueperi
Strainstrain DSM 13587

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Thiobaca trueperi strain DSM 13587
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiobaca trueperi strain DSM 13587 Ga0244666_121, whole genome

Gene Summary

Adenine Count

763317 bp

Thymine Count

779233 bp

Guanine Count

1277609 bp

Cytosine Count

1253131 bp

Genome Length

4073386 bp

Protein-coding Genes

3590 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
signal transduction histidine kinaseEDC35_102410Not AvailablePositive1204416 - 1207169102527.0
nadp-dependent 3-hydroxy acid dehydrogenase ydfgEDC35_102411Not AvailableNegative1207460 - 120821225976.0
cobalt-precorrin 5a hydrolaseEDC35_102412Not AvailableNegative1208475 - 120887614065.1
cobalt-precorrin 5a hydrolaseEDC35_102413Not AvailableNegative1208873 - 120960125945.7
precorrin-2 c20-methyltransferase /cobalt-factor ii c20-methyltransferaseEDC35_102414Not AvailableNegative1209589 - 121034126406.8
uncharacterized protein duf29EDC35_102415Not AvailablePositive1210643 - 121111918421.7
precorrin-8x methylmutaseEDC35_102416Not AvailableNegative1211161 - 121182322893.8
sirohydrochlorin cobaltochelataseEDC35_102417Not AvailableNegative1211810 - 121264030547.1
precorrin-4 c11-methyltransferaseEDC35_102418Not AvailableNegative1212798 - 121357726984.3
pas domain s-box-containing protein/diguanylate cyclase (ggdef)-like proteinEDC35_102419Not AvailableNegative1213574 - 121616595606.9

Displaying genes 1061 – 1070 of 3641 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.