Primorskyibacter sedentarius strain DSM 104836

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Primorskyibacter

Description

Primorskyibacter sedentarius strain DSM 104836 is characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number SLZU00000000.1, which is essential for referencing its genomic data in scientific databases. The streamlined nature of its genome may suggest adaptations to specific ecological niches or environments, potentially allowing for efficient resource utilization. The presence of a single replicon can be indicative of a lesser genetic redundancy, which might also reflect an evolutionary strategy that prioritizes essential functions for survival in its habitat. Understanding the genomic characteristics of Primorskyibacter sedentarius could provide insights into its ecological role, particularly in relation to its interactions within microbial communities. The unique traits of this strain may contribute to its functions in biogeochemical cycles or its role in the microbiome of its native environment. Further research could elucidate how these specific genomic features influence its behavior and interactions in the ecosystem, but the current knowledge is limited to its replicon count and accession information.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPrimorskyibacter
SpeciesPrimorskyibacter sedentarius
Strainstrain DSM 104836

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Primorskyibacter sedentarius strain DSM 104836 Ga0244736_185,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
monosaccharide abc transporter substrate-binding protein (cut2 family)EDD52_11115Not AvailableNegative3123727 - 312467733348.5
putative dehydrogenaseEDD52_11116Not AvailableNegative3125110 - 312624340737.4
2-keto-myo-inositol dehydrataseEDD52_11117Not AvailableNegative3126255 - 312714832847.7
putative dehydrogenaseEDD52_11118Not AvailableNegative3127168 - 312827139576.1
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolaseEDD52_11119Not AvailablePositive3128411 - 313027967695.2
5-dehydro-2-deoxygluconokinaseEDD52_11120Not AvailablePositive3130279 - 313125934672.1
5-deoxyglucuronate isomeraseEDD52_11121Not AvailablePositive3131274 - 313213132071.7
fructose-bisphosphate aldolaseEDD52_11122Not AvailablePositive3132128 - 313295829047.7
myo-inositol 2-dehydrogenaseEDD52_11123Not AvailablePositive3132960 - 313394935072.9
ca2+-binding rtx toxin-like proteinEDD52_11124Not AvailableNegative3134174 - 3140536219596.0

Displaying genes 2961 – 2970 of 4789 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.