Primorskyibacter sedentarius strain DSM 104836

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Primorskyibacter

Description

Primorskyibacter sedentarius strain DSM 104836 is characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number SLZU00000000.1, which is essential for referencing its genomic data in scientific databases. The streamlined nature of its genome may suggest adaptations to specific ecological niches or environments, potentially allowing for efficient resource utilization. The presence of a single replicon can be indicative of a lesser genetic redundancy, which might also reflect an evolutionary strategy that prioritizes essential functions for survival in its habitat. Understanding the genomic characteristics of Primorskyibacter sedentarius could provide insights into its ecological role, particularly in relation to its interactions within microbial communities. The unique traits of this strain may contribute to its functions in biogeochemical cycles or its role in the microbiome of its native environment. Further research could elucidate how these specific genomic features influence its behavior and interactions in the ecosystem, but the current knowledge is limited to its replicon count and accession information.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPrimorskyibacter
SpeciesPrimorskyibacter sedentarius
Strainstrain DSM 104836

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Primorskyibacter sedentarius strain DSM 104836 Ga0244736_185,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gamma-butyrobetaine dioxygenaseEDD52_105119Not AvailablePositive2117455 - 211860043117.1
antitoxin ccdaEDD52_105120Not AvailablePositive2118684 - 21189389222.77
toxin ccdbEDD52_105121Not AvailablePositive2118926 - 211921610440.8
lysr family transcriptional regulatorEDD52_105122Not AvailablePositive2119436 - 212033533381.2
iclr family transcriptional regulatorEDD52_105123Not AvailableNegative2120449 - 212129431803.3
choline dehydrogenaseEDD52_105124Not AvailablePositive2121327 - 212292858048.4
trap-type mannitol/chloroaromatic compound transport system substrate-binding proteinEDD52_105125Not AvailablePositive2123073 - 212416739226.6
tripartite atp-independent transporter dctm subunitEDD52_105126Not AvailablePositive2124252 - 212656485406.6
hypothetical proteinEDD52_105127Not AvailablePositive2126574 - 212761737654.6
sulfopropanediol 3-dehydrogenaseEDD52_105128Not AvailablePositive2127639 - 212894646690.2

Displaying genes 2011 – 2020 of 4789 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.