Primorskyibacter sedentarius strain DSM 104836

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Primorskyibacter

Description

Primorskyibacter sedentarius strain DSM 104836 is characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number SLZU00000000.1, which is essential for referencing its genomic data in scientific databases. The streamlined nature of its genome may suggest adaptations to specific ecological niches or environments, potentially allowing for efficient resource utilization. The presence of a single replicon can be indicative of a lesser genetic redundancy, which might also reflect an evolutionary strategy that prioritizes essential functions for survival in its habitat. Understanding the genomic characteristics of Primorskyibacter sedentarius could provide insights into its ecological role, particularly in relation to its interactions within microbial communities. The unique traits of this strain may contribute to its functions in biogeochemical cycles or its role in the microbiome of its native environment. Further research could elucidate how these specific genomic features influence its behavior and interactions in the ecosystem, but the current knowledge is limited to its replicon count and accession information.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPrimorskyibacter
SpeciesPrimorskyibacter sedentarius
Strainstrain DSM 104836

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Primorskyibacter sedentarius strain DSM 104836 Ga0244736_185,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tripartite atp-independent transporter dctm subunitEDD52_103281Not AvailableNegative1627837 - 162943257221.8
trap-type mannitol/chloroaromatic compound transport system permease small subunitEDD52_103282Not AvailableNegative1629432 - 163024430355.6
trap-type mannitol/chloroaromatic compound transport system substrate-binding proteinEDD52_103283Not AvailableNegative1630350 - 163136336760.2
gntr family transcriptional regulatorEDD52_103284Not AvailablePositive1631578 - 163229426593.7
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathwayEDD52_103285Not AvailablePositive1632291 - 163313629878.6
lactate dehydrogenase-like 2-hydroxyacid dehydrogenaseEDD52_103286Not AvailableNegative1633240 - 163418733524.2
aspartate/methionine/tyrosine aminotransferaseEDD52_103287Not AvailableNegative1634203 - 163537242301.6
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)EDD52_103288Not AvailablePositive1635653 - 163642327304.7
hypothetical proteinEDD52_103289Not AvailablePositive1636707 - 163718016697.2
putative superfamily iii holin-xEDD52_103290Not AvailablePositive1637180 - 163758413838.1

Displaying genes 1561 – 1570 of 4789 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.