Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Sphingobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Sphingobacterium |
| Species | Sphingobacterium sp. JUb20 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1997563 bp
Thymine Count
1988589 bp
Guanine Count
1138378 bp
Cytosine Count
1123156 bp
Genome Length
6247893 bp
Protein-coding Genes
5291 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor (ecf subfamily) | EDF66_109204 | Not Available | Negative | 4050473 - 4050949 | 18522.4 |
| hypothetical protein | EDF66_109205 | Not Available | Negative | 4050954 - 4051163 | 7770.7 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | EDF66_109206 | Not Available | Positive | 4051538 - 4052959 | 51878.3 |
| allosteric nadp-dependent malic enzyme | EDF66_109207 | Not Available | Positive | 4053069 - 4055348 | 82517.9 |
| holliday junction dna helicase subunit ruva | EDF66_109208 | Not Available | Positive | 4055361 - 4055942 | 21146.9 |
| gaf domain-containing protein | EDF66_109209 | Not Available | Positive | 4056013 - 4056483 | 17182.6 |
| wd-40 repeat-containing protein | EDF66_109210 | Not Available | Negative | 4056490 - 4057410 | 34347.3 |
| phosphoribosyl-atp pyrophosphatase /phosphoribosyl-amp cyclohydrolase | EDF66_109211 | Not Available | Negative | 4057555 - 4058139 | 22188.4 |
| cyclase | EDF66_109212 | Not Available | Negative | 4058201 - 4058953 | 26984.2 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | EDF66_109213 | Not Available | Negative | 4058956 - 4059708 | 28001.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





