Ochrobactrum sp. BH3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Brucellaceae

Genus

Ochrobactrum

Description

Ochrobactrum sp. BH3 is a distinct bacterial strain characterized by its single replicon. The strain is cataloged under the accession number SLYR00000000.1, which allows for its identification and reference in scientific literature. Ochrobactrum species, including strain BH3, are known for their versatility in various environments, often being associated with soil and water. This adaptability may contribute to their ecological roles, such as in bioremediation processes, where they can degrade pollutants or contribute to nutrient cycling. With just one replicon, Ochrobactrum sp. BH3 may exhibit a streamlined genomic structure, potentially influencing its metabolic capabilities and ecological interactions. The biological characteristics of Ochrobactrum sp. BH3, including its growth conditions and metabolic pathways, would benefit from further research to clarify its specific ecological roles and applications. Understanding the traits of this strain could provide insights into its potential uses in environmental microbiology or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyBrucellaceae
GenusOchrobactrum
SpeciesOchrobactrum sp. BH3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ochrobactrum sp. BH3 Ga0304822_148, whole genome shotgun sequence.

Gene Summary

Adenine Count

1014858 bp

Thymine Count

1021713 bp

Guanine Count

1167634 bp

Cytosine Count

1160989 bp

Genome Length

4365194 bp

Protein-coding Genes

4093 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
6,7-dimethyl-8-ribityllumazine synthaseEDF68_103134Not AvailablePositive2047970 - 204844617472.9
fdhd proteinEDF68_103135Not AvailableNegative2048480 - 204928929078.1
uncharacterized protein (tigr01244 family)EDF68_103136Not AvailablePositive2049454 - 204979812284.2
hypothetical proteinEDF68_103137Not AvailableNegative2049868 - 205022713292.3
iron(iii) transport system permease proteinEDF68_103138Not AvailableNegative2050583 - 205220258197.8
iron(iii) transport system substrate-binding proteinEDF68_103139Not AvailableNegative2052346 - 205336236281.1
iron(iii) transport system atp-binding proteinEDF68_103140Not AvailableNegative2053474 - 205456839901.1
glycine/d-amino acid oxidase-like deaminating enzymeEDF68_103141Not AvailablePositive2054777 - 205610547806.5
blue copper oxidaseEDF68_103142Not AvailableNegative2056153 - 205773657604.7
hypothetical proteinEDF68_103143Not AvailableNegative2057845 - 205825514731.1

Displaying genes 2101 – 2110 of 4254 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.