Raoultella ornithinolytica strain JUb54

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Raoultella ornithinolytica strain JUb54 is a Gram-negative, rod-shaped bacterium classified as a chemoheterotroph. This strain is a facultative anaerobe, capable of thriving in both the presence and absence of oxygen. It does not exhibit mobility but does possess flagella, which may play a role in its interactions within various environments. This bacterium is mesophilic, with an optimal growth temperature of 37°C, indicating it can effectively proliferate in conditions similar to human body temperature. Raoultella ornithinolytica strain JUb54 has been found in multiple habitats, suggesting a versatile ecological niche. Its hosts include Homo sapiens, various insect species, Ixodida (ticks), Termitoidae (termites), and the plant Crinum macowanii. Clinically, this strain is associated with several health issues, including bacteremia, human infections, abdominal abscesses, sepsis, cholecystitis, and gallbladder perforation. These health effects highlight the pathogenic potential of R. ornithinolytica in humans, particularly concerning abdominal and systemic infections that can lead to severe complications such as multiple organ failure and fish poisoning. The presence of this bacterium in both human hosts and diverse ecological niches underscores its role as an opportunistic pathogen. Its ability to thrive in various environments and its association with significant health risks indicate that R. ornithinolytica strain JUb54 warrants further investigation to better understand its ecological impact and implications for public health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella ornithinolytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Raoultella ornithinolytica strain JUb54
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Insecta, Ixodida
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Raoultella ornithinolytica strain JUb54 Ga0304837_121, whole

Gene Summary

Adenine Count

1233731 bp

Thymine Count

1237641 bp

Guanine Count

1681260 bp

Cytosine Count

1667820 bp

Genome Length

5820670 bp

Protein-coding Genes

5204 genes

Non-Coding Genes

241 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exodeoxyribonuclease vii large subunitEC841_110108Not AvailablePositive5223830 - 522512248601.2
zinc ribbon proteinEC841_110109Not AvailableNegative5225123 - 52253478125.81
oxidoreductase family proteinEC841_110110Not AvailableNegative5225398 - 522648939720.2
gtp-binding proteinEC841_110111Not AvailableNegative5226624 - 522810255074.1
beta-barrel assembly machine subunit bambEC841_110112Not AvailableNegative5228217 - 522939542040.7
putative negative regulator of rcsb-dependent stress responseEC841_110113Not AvailableNegative5229406 - 523002622398.5
histidyl-trna synthetaseEC841_110114Not AvailableNegative5230061 - 523133547124.3
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseEC841_110116Not AvailableNegative5231427 - 523254840883.4
cytoskeleton protein rodzEC841_110117Not AvailableNegative5232575 - 523356434841.0
23s rrna m(2)a-2503 methyltransferaseEC841_110118Not AvailableNegative5233837 - 523500343470.4

Displaying genes 4901 – 4910 of 5445 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

Health ConditionRelationReference
Abdominal infectionCausesPMC10981363
CholecystitisCausesPMC10981363
Gallbladder perforationCausesPMC10981363
Abdominal abscessesCausesPMC10981363
SepsisCausesPMC10981363
Multiple organ failureCausesPMC10981363
Abdominal abscessCausesPMC10981363
BacteremiaCausesPMC8123537
Fish poisoningCausesPMC8253079
Human infectionsCausesPMC10648639

Displaying health effects 1 – 10 of 10 in total