Raoultella ornithinolytica strain JUb54

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Raoultella ornithinolytica strain JUb54 is a Gram-negative, rod-shaped bacterium classified as a chemoheterotroph. This strain is a facultative anaerobe, capable of thriving in both the presence and absence of oxygen. It does not exhibit mobility but does possess flagella, which may play a role in its interactions within various environments. This bacterium is mesophilic, with an optimal growth temperature of 37°C, indicating it can effectively proliferate in conditions similar to human body temperature. Raoultella ornithinolytica strain JUb54 has been found in multiple habitats, suggesting a versatile ecological niche. Its hosts include Homo sapiens, various insect species, Ixodida (ticks), Termitoidae (termites), and the plant Crinum macowanii. Clinically, this strain is associated with several health issues, including bacteremia, human infections, abdominal abscesses, sepsis, cholecystitis, and gallbladder perforation. These health effects highlight the pathogenic potential of R. ornithinolytica in humans, particularly concerning abdominal and systemic infections that can lead to severe complications such as multiple organ failure and fish poisoning. The presence of this bacterium in both human hosts and diverse ecological niches underscores its role as an opportunistic pathogen. Its ability to thrive in various environments and its association with significant health risks indicate that R. ornithinolytica strain JUb54 warrants further investigation to better understand its ecological impact and implications for public health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella ornithinolytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Raoultella ornithinolytica strain JUb54
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Insecta, Ixodida
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Raoultella ornithinolytica strain JUb54 Ga0304837_121, whole

Gene Summary

Adenine Count

1233731 bp

Thymine Count

1237641 bp

Guanine Count

1681260 bp

Cytosine Count

1667820 bp

Genome Length

5820670 bp

Protein-coding Genes

5204 genes

Non-Coding Genes

241 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rpir family transcriptional regulatorEC841_108187Not AvailableNegative4804723 - 480558031645.8
5-dehydro-2-deoxygluconokinaseEC841_108188Not AvailableNegative4805730 - 480764370472.6
hypothetical proteinEC841_108189Not AvailablePositive4807919 - 48080354475.51
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolaseEC841_108190Not AvailablePositive4808170 - 481011070741.2
myo-inositol 2-dehydrogenaseEC841_108191Not AvailablePositive4810159 - 481117236740.8
myo-inositol catabolism protein iolhEC841_108192Not AvailablePositive4811215 - 481209934052.5
2-keto-myo-inositol dehydrataseEC841_108193Not AvailablePositive4812123 - 481302233193.8
major inositol transporter-like sp family mfs transporterEC841_108194Not AvailablePositive4813171 - 481466454559.8
4-hydroxy-tetrahydrodipicolinate synthaseEC841_108195Not AvailablePositive4815032 - 481594032236.8
putative yjhg/yagf family dehydrataseEC841_108196Not AvailablePositive4815955 - 481792269209.0

Displaying genes 4521 – 4530 of 5445 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

Health ConditionRelationReference
Abdominal infectionCausesPMC10981363
CholecystitisCausesPMC10981363
Gallbladder perforationCausesPMC10981363
Abdominal abscessesCausesPMC10981363
SepsisCausesPMC10981363
Multiple organ failureCausesPMC10981363
Abdominal abscessCausesPMC10981363
BacteremiaCausesPMC8123537
Fish poisoningCausesPMC8253079
Human infectionsCausesPMC10648639

Displaying health effects 1 – 10 of 10 in total