Raoultella ornithinolytica strain JUb54

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Raoultella ornithinolytica strain JUb54 is a Gram-negative, rod-shaped bacterium classified as a chemoheterotroph. This strain is a facultative anaerobe, capable of thriving in both the presence and absence of oxygen. It does not exhibit mobility but does possess flagella, which may play a role in its interactions within various environments. This bacterium is mesophilic, with an optimal growth temperature of 37°C, indicating it can effectively proliferate in conditions similar to human body temperature. Raoultella ornithinolytica strain JUb54 has been found in multiple habitats, suggesting a versatile ecological niche. Its hosts include Homo sapiens, various insect species, Ixodida (ticks), Termitoidae (termites), and the plant Crinum macowanii. Clinically, this strain is associated with several health issues, including bacteremia, human infections, abdominal abscesses, sepsis, cholecystitis, and gallbladder perforation. These health effects highlight the pathogenic potential of R. ornithinolytica in humans, particularly concerning abdominal and systemic infections that can lead to severe complications such as multiple organ failure and fish poisoning. The presence of this bacterium in both human hosts and diverse ecological niches underscores its role as an opportunistic pathogen. Its ability to thrive in various environments and its association with significant health risks indicate that R. ornithinolytica strain JUb54 warrants further investigation to better understand its ecological impact and implications for public health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella ornithinolytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Raoultella ornithinolytica strain JUb54
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Insecta, Ixodida
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Raoultella ornithinolytica strain JUb54 Ga0304837_121, whole

Gene Summary

Adenine Count

1233731 bp

Thymine Count

1237641 bp

Guanine Count

1681260 bp

Cytosine Count

1667820 bp

Genome Length

5820670 bp

Protein-coding Genes

5204 genes

Non-Coding Genes

241 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
eal domain-containing protein (putative c-di-gmp-specific phosphodiesterase class i)EC841_10392Not AvailablePositive2281395 - 228296958462.6
putative tellurium resistance membrane protein tercEC841_10393Not AvailableNegative2283012 - 228457156924.8
pts system d-mannose-specific iia component (man family) /pts system d-mannose-specific iib component (man family)EC841_10394Not AvailablePositive2285019 - 228599035152.6
pts system d-mannose-specific iic component (man family)EC841_10395Not AvailablePositive2286046 - 228684627534.5
pts system d-mannose-specific iid component (man family)EC841_10396Not AvailablePositive2286859 - 228771030960.6
uncharacterized membrane protein yobd (upf0266 family)EC841_10397Not AvailablePositive2287774 - 228823217651.5
putative mn2+ efflux pump mntpEC841_10398Not AvailablePositive2288659 - 228922519800.8
23s rrna m(1)g-745 methyltransferaseEC841_10399Not AvailableNegative2289229 - 229002329648.4
cell division protein ftsi (penicillin-binding protein 3)EC841_103100Not AvailableNegative2290085 - 229183063416.2
putative cold-shock dna-binding proteinEC841_103102Not AvailableNegative2292022 - 22922317402.76

Displaying genes 2201 – 2210 of 5445 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

Health ConditionRelationReference
Abdominal infectionCausesPMC10981363
CholecystitisCausesPMC10981363
Gallbladder perforationCausesPMC10981363
Abdominal abscessesCausesPMC10981363
SepsisCausesPMC10981363
Multiple organ failureCausesPMC10981363
Abdominal abscessCausesPMC10981363
BacteremiaCausesPMC8123537
Fish poisoningCausesPMC8253079
Human infectionsCausesPMC10648639

Displaying health effects 1 – 10 of 10 in total