Raoultella ornithinolytica strain JUb54

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Raoultella ornithinolytica strain JUb54 is a Gram-negative, rod-shaped bacterium classified as a chemoheterotroph. This strain is a facultative anaerobe, capable of thriving in both the presence and absence of oxygen. It does not exhibit mobility but does possess flagella, which may play a role in its interactions within various environments. This bacterium is mesophilic, with an optimal growth temperature of 37°C, indicating it can effectively proliferate in conditions similar to human body temperature. Raoultella ornithinolytica strain JUb54 has been found in multiple habitats, suggesting a versatile ecological niche. Its hosts include Homo sapiens, various insect species, Ixodida (ticks), Termitoidae (termites), and the plant Crinum macowanii. Clinically, this strain is associated with several health issues, including bacteremia, human infections, abdominal abscesses, sepsis, cholecystitis, and gallbladder perforation. These health effects highlight the pathogenic potential of R. ornithinolytica in humans, particularly concerning abdominal and systemic infections that can lead to severe complications such as multiple organ failure and fish poisoning. The presence of this bacterium in both human hosts and diverse ecological niches underscores its role as an opportunistic pathogen. Its ability to thrive in various environments and its association with significant health risks indicate that R. ornithinolytica strain JUb54 warrants further investigation to better understand its ecological impact and implications for public health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella ornithinolytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Raoultella ornithinolytica strain JUb54
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Insecta, Ixodida
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Raoultella ornithinolytica strain JUb54 Ga0304837_121, whole

Gene Summary

Adenine Count

1233731 bp

Thymine Count

1237641 bp

Guanine Count

1681260 bp

Cytosine Count

1667820 bp

Genome Length

5820670 bp

Protein-coding Genes

5204 genes

Non-Coding Genes

241 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEC841_1011288Not AvailablePositive1330360 - 133108525987.1
nicotinamidase-related amidaseEC841_1011289Not AvailablePositive1331114 - 133170121030.5
hypothetical proteinEC841_1011290Not AvailableNegative1332265 - 133259413065.1
l-iditol 2-dehydrogenaseEC841_1011291Not AvailableNegative1332651 - 133370637837.4
phosphocarrier proteinEC841_1011292Not AvailableNegative1334230 - 13345029698.74
fructose-bisphosphate aldolaseEC841_1011293Not AvailableNegative1334547 - 133538630381.5
gntr family transcriptional regulatorEC841_1011294Not AvailableNegative1335392 - 133613528042.9
l-iditol 2-dehydrogenaseEC841_1011295Not AvailableNegative1336319 - 133735337770.5
sugar (pentulose or hexulose) kinaseEC841_1011296Not AvailableNegative1337350 - 133886455744.7
pts system unknown substrate iic component (gat family)EC841_1011297Not AvailableNegative1338944 - 134033850154.4

Displaying genes 1331 – 1340 of 5445 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

Health ConditionRelationReference
Abdominal infectionCausesPMC10981363
CholecystitisCausesPMC10981363
Gallbladder perforationCausesPMC10981363
Abdominal abscessesCausesPMC10981363
SepsisCausesPMC10981363
Multiple organ failureCausesPMC10981363
Abdominal abscessCausesPMC10981363
BacteremiaCausesPMC8123537
Fish poisoningCausesPMC8253079
Human infectionsCausesPMC10648639

Displaying health effects 1 – 10 of 10 in total