Serpentinicella alkaliphila strain DSM 100013

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Natronincolaceae

Genus

Serpentinicella

Description

Serpentinicella alkaliphila strain DSM 100013 is a Gram-positive, anaerobic, rod-shaped bacterium. This strain is characterized by its mesophilic nature, with an optimal growth temperature of 37°C, allowing it to thrive in moderate thermal conditions. Notably, it is a spore-forming organism, which may enhance its survival in various environments by providing resistance to adverse conditions. The strain contains a single replicon, indicating a simplified genetic architecture compared to some other bacteria that may possess multiple replicons. The accession number for this strain is SLYC00000000.1, which can be used for further reference in genomic databases. The ecological role of Serpentinicella alkaliphila may be linked to its anaerobic lifestyle and capability for spore formation, suggesting potential interactions with other microbial communities in oxygen-limited environments. Its adaptability to mesophilic conditions may also indicate its presence in terrestrial ecosystems, where it could contribute to organic matter decomposition and nutrient cycling. Overall, the traits of Serpentinicella alkaliphila highlight its potential significance in specific ecological niches, particularly in anaerobic conditions, where it may play a role in maintaining microbial diversity and ecosystem functionality.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyNatronincolaceae
GenusSerpentinicella
SpeciesSerpentinicella alkaliphila
Strainstrain DSM 100013

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Serpentinicella alkaliphila strain DSM 100013 Ga0244716_1105,

Gene Summary

Adenine Count

1022674 bp

Thymine Count

1024841 bp

Guanine Count

483299 bp

Cytosine Count

486793 bp

Genome Length

3017800 bp

Protein-coding Genes

2969 genes

Non-Coding Genes

35 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-dehydro-3-deoxyphosphogluconate aldolase/(4s)-4-hydroxy-2-oxoglutarate aldolaseEDD79_1001132Not AvailablePositive130108 - 13073422396.6
2-dehydro-3-deoxygluconokinaseEDD79_1001133Not AvailablePositive130754 - 13177637851.6
hypothetical proteinEDD79_1001134Not AvailableNegative132001 - 1322499865.17
fucose permeaseEDD79_1001135Not AvailableNegative132300 - 13349643255.5
cupin domainEDD79_1001136Not AvailableNegative133544 - 13388513029.6
fructuronate reductaseEDD79_1001137Not AvailableNegative134022 - 13563560474.7
mannonate dehydrataseEDD79_1001138Not AvailableNegative135780 - 13689242067.8
ycxb-like proteinEDD79_1001139Not AvailableNegative136948 - 13743018481.1
tripartite atp-independent transporter dctm subunitEDD79_1001140Not AvailableNegative137427 - 13871945651.2
trap-type c4-dicarboxylate transport system permease small subunitEDD79_1001141Not AvailableNegative138709 - 13924219888.3

Displaying genes 141 – 150 of 3004 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.