Cricetibacter osteomyelitidis strain DSM 28404

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Cricetibacter

Description

Cricetibacter osteomyelitidis strain DSM 28404 is a microaerophilic bacterium, meaning it requires reduced levels of oxygen for optimal growth. This characteristic is significant as it suggests that the organism thrives in environments where oxygen is present but not in high concentrations, which can be typical of certain host tissues or specific ecological niches. The strain is characterized by having a single replicon, which indicates a streamlined genomic structure that may facilitate efficient replication and adaptation within its ecological context. The accession number for this strain is SLYB00000000.1, which serves as a reference for researchers seeking genomic and taxonomic information about Cricetibacter osteomyelitidis. Understanding the microaerophilic nature and genomic characteristics of this bacterium can provide insights into its potential roles in various biological or ecological systems. For instance, its adaptation to low-oxygen environments may suggest a niche in the microbiota of certain host organisms or specific habitats where oxygen levels fluctuate. Further study of this strain could illuminate its interactions within microbial communities, its pathogenic potential, or its role in nutrient cycling in microaerophilic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusCricetibacter
SpeciesCricetibacter osteomyelitidis
Strainstrain DSM 28404

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cricetibacter osteomyelitidis strain DSM 28404 Ga0244707_162,

Gene Summary

Adenine Count

807945 bp

Thymine Count

809980 bp

Guanine Count

556789 bp

Cytosine Count

557307 bp

Genome Length

2732036 bp

Protein-coding Genes

2529 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integraseEDC44_10934Not AvailableNegative1204873 - 120613848717.3
Tmrna,resume consensus sequence (at 85): aatagtcgcaaacgacgaNot AvailableNot AvailablePositive1206390 - 1206756Not Available
uncharacterized membrane protein ybje (duf340 family)EDC44_10936Not AvailableNegative1206866 - 120777432893.6
abc-type nickel/cobalt efflux system permease component rcnaEDC44_10937Not AvailableNegative1207781 - 120879737516.9
abc-type uncharacterized transport system substrate-binding proteinEDC44_10938Not AvailableNegative1208788 - 120944125189.2
atp-binding cassette chvd family proteinEDC44_10939Not AvailablePositive1209722 - 121139262605.4
agza family xanthine/uracil permease-like mfs transporterEDC44_10940Not AvailablePositive1211458 - 121278645529.3
lsu ribosomal protein l20pEDC44_10941Not AvailableNegative1212871 - 121322413341.5
lsu ribosomal protein l35pEDC44_10942Not AvailableNegative1213282 - 12134797438.48
translation initiation factor 3 (bif-3)EDC44_10944Not AvailableNegative1213726 - 121413915569.0

Displaying genes 1181 – 1190 of 2587 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.