Frisingicoccus caecimuris strain DSM 28559

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Frisingicoccus

Description

Frisingicoccus caecimuris strain DSM 28559 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This characteristic is significant as it suggests the organism may be adapted to specific ecological niches where oxygen levels are low, such as the gastrointestinal tracts of animals or anaerobic sediments. The genome of Frisingicoccus caecimuris strain DSM 28559 contains a single replicon, which is indicative of its genetic structure. A single replicon can simplify replication and maintenance of its genetic material, offering insights into the organism's evolutionary adaptations. The strain is cataloged with the accession number SLXA00000000.1, which provides a reference point for researchers seeking genomic information or conducting comparative studies with other microorganisms. The anaerobic nature of Frisingicoccus caecimuris strain DSM 28559 may play a crucial role in biogeochemical cycles, particularly in the degradation of organic matter in anaerobic environments. Understanding its metabolic capabilities can provide insights into its ecological function, especially in nutrient cycling and interactions with other microbial communities in anaerobic ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusFrisingicoccus
SpeciesFrisingicoccus caecimuris
Strainstrain DSM 28559

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frisingicoccus caecimuris strain DSM 28559 Ga0310541_135, whole

Gene Summary

Adenine Count

753561 bp

Thymine Count

775894 bp

Guanine Count

559950 bp

Cytosine Count

626765 bp

Genome Length

2716364 bp

Protein-coding Genes

2582 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyruvate phosphate dikinaseEV212_105102Not AvailablePositive1455494 - 145811896249.5
trk system potassium uptake protein trkhEV212_105103Not AvailablePositive1458340 - 145967747991.5
trk system potassium uptake protein trkaEV212_105104Not AvailablePositive1459694 - 146034124048.2
two-component system sensor histidine kinase kdpdEV212_105105Not AvailablePositive1460378 - 1463260106865.0
two-component system kdp operon response regulator kdpeEV212_105106Not AvailablePositive1463253 - 146395426210.7
amino acid abc transporter substrate-binding protein (paat family)EV212_105107Not AvailablePositive1464105 - 146493529165.0
polar amino acid transport system permease proteinEV212_105108Not AvailablePositive1465060 - 146573724615.1
amino acid abc transporter atp-binding protein (paat family)EV212_105109Not AvailablePositive1465718 - 146645827340.6
cytidylate kinaseEV212_105110Not AvailablePositive1466479 - 146706322318.8
hypothetical proteinEV212_105111Not AvailablePositive1467235 - 1470183113357.0

Displaying genes 1451 – 1460 of 2683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.