Frisingicoccus caecimuris strain DSM 28559

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Frisingicoccus

Description

Frisingicoccus caecimuris strain DSM 28559 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This characteristic is significant as it suggests the organism may be adapted to specific ecological niches where oxygen levels are low, such as the gastrointestinal tracts of animals or anaerobic sediments. The genome of Frisingicoccus caecimuris strain DSM 28559 contains a single replicon, which is indicative of its genetic structure. A single replicon can simplify replication and maintenance of its genetic material, offering insights into the organism's evolutionary adaptations. The strain is cataloged with the accession number SLXA00000000.1, which provides a reference point for researchers seeking genomic information or conducting comparative studies with other microorganisms. The anaerobic nature of Frisingicoccus caecimuris strain DSM 28559 may play a crucial role in biogeochemical cycles, particularly in the degradation of organic matter in anaerobic environments. Understanding its metabolic capabilities can provide insights into its ecological function, especially in nutrient cycling and interactions with other microbial communities in anaerobic ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusFrisingicoccus
SpeciesFrisingicoccus caecimuris
Strainstrain DSM 28559

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frisingicoccus caecimuris strain DSM 28559 Ga0310541_135, whole

Gene Summary

Adenine Count

753561 bp

Thymine Count

775894 bp

Guanine Count

559950 bp

Cytosine Count

626765 bp

Genome Length

2716364 bp

Protein-coding Genes

2582 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (cytidine/uridine-2'-o-)-methyltransferaseEV212_10423Not AvailableNegative1112209 - 111271219274.3
aminotransferaseEV212_10424Not AvailableNegative1112713 - 111389744441.8
dna-binding lrp family transcriptional regulatorEV212_10425Not AvailableNegative1113894 - 111438518490.5
thiamin-phosphate kinaseEV212_10426Not AvailableNegative1114409 - 111539535444.8
hypothetical proteinEV212_10427Not AvailableNegative1115411 - 11155033373.57
dna polymerase-3 subunit alpha (gram-positive type)EV212_10428Not AvailableNegative1115518 - 111625828443.2
radical sam superfamily enzyme ygiq (upf0313 family)EV212_10429Not AvailableNegative1116252 - 111799468562.4
radical sam family proteinEV212_10430Not AvailablePositive1118148 - 111902032440.5
putative dna-binding protein (upf0251 family)EV212_10431Not AvailableNegative1119091 - 111982826050.7
putative mate family efflux proteinEV212_10432Not AvailableNegative1119890 - 112125149556.5

Displaying genes 1121 – 1130 of 2683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.