Acetobacteroides hydrogenigenes strain RL-C

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Acetobacteroides

Description

Acetobacteroides hydrogenigenes strain RL-C is characterized by having a single replicon, which may contribute to its genomic stability and efficiency in cellular processes. The strain is cataloged under the accession number SLWB00000000.1, indicating its presence in genomic databases for research and reference. This strain belongs to the genus Acetobacteroides, which is known for its capacity to utilize various substrates, potentially playing a role in anaerobic fermentation processes. The ability of Acetobacteroides species to metabolize different compounds suggests a significant function in microbial communities, particularly in environments rich in organic matter. The presence of a singular replicon can influence the genomic organization and gene expression, which may enhance the adaptability of the strain in fluctuating ecological niches. This trait could be particularly important in anaerobic environments where Acetobacteroides hydrogenigenes may thrive by breaking down complex carbohydrates and contributing to the carbon cycle. In summary, Acetobacteroides hydrogenigenes strain RL-C, with its single replicon and documented accession, illustrates the adaptability and ecological role of this genus in anaerobic digestion processes and organic material breakdown. Its characteristics highlight the importance of such microorganisms in maintaining ecosystem functions and nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAcetobacteroides
SpeciesAcetobacteroides hydrogenigenes
Strainstrain RL-C

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acetobacteroides hydrogenigenes strain RL-C Ga0181008_132, whole

Gene Summary

Adenine Count

1066902 bp

Thymine Count

1030933 bp

Guanine Count

863490 bp

Cytosine Count

899329 bp

Genome Length

3861100 bp

Protein-coding Genes

3193 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCLV25_10884Not AvailablePositive2309822 - 231028917143.3
hypothetical proteinCLV25_10885Not AvailablePositive2310324 - 231067412942.2
outer membrane receptor protein involved in fe transportCLV25_10886Not AvailablePositive2310803 - 231292979326.0
putative mfs family arabinose efflux permeaseCLV25_10887Not AvailablePositive2313115 - 231432344990.3
oxygen-independent coproporphyrinogen-3 oxidaseCLV25_10888Not AvailablePositive2314310 - 231568951517.4
oxygen-dependent protoporphyrinogen oxidaseCLV25_10889Not AvailablePositive2315691 - 231707349738.7
23s rrna (cytosine1962-c5)-methyltransferaseCLV25_10890Not AvailableNegative2317633 - 231882044177.7
3'-5' exonucleaseCLV25_10891Not AvailableNegative2318822 - 231941221871.7
uncharacterized protein duf5063CLV25_10892Not AvailableNegative2319415 - 232001723559.4
hypothetical proteinCLV25_10893Not AvailablePositive2320182 - 232093427221.5

Displaying genes 2011 – 2020 of 3280 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.