Novosphingobium sp. PhB165

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PhB165 is a bacterial species characterized by the presence of flagella, which suggests a potential for motility in various environments. This feature allows the organism to navigate through its habitat, potentially enhancing its ability to colonize niches and access nutrients. Genetically, Novosphingobium sp. PhB165 contains a single replicon, indicating a streamlined genomic structure, which may facilitate efficient replication and cellular function. The genomic data for this species is cataloged under the accession number SLVB00000000.1, making it accessible for further study and comparison with other bacterial species. In terms of ecological significance, the motility conferred by flagella may play a crucial role in the organism's survival and adaptation in diverse environments. This capability could enable Novosphingobium sp. PhB165 to effectively respond to changes in its surroundings, such as the availability of nutrients or the presence of competitors. Overall, these traits underscore the potential importance of Novosphingobium sp. PhB165 in various ecological contexts, particularly in the cycling of organic materials and the degradation of pollutants in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PhB165
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PhB165 Ga0304885_128, whole genome shotgun

Gene Summary

Adenine Count

1029850 bp

Thymine Count

1036972 bp

Guanine Count

1872543 bp

Cytosine Count

1857741 bp

Genome Length

5797116 bp

Protein-coding Genes

5041 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative f420-dependent oxidoreductaseEDF56_101450Not AvailableNegative451717 - 45263733517.8
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)EDF56_101451Not AvailableNegative452651 - 45352630860.0
2-phospho-l-lactate guanylyltransferaseEDF56_101452Not AvailableNegative453523 - 45416722880.7
reduced coenzyme f420:nadp oxidoreductaseEDF56_101453Not AvailableNegative454164 - 45481421963.3
coenzyme f420-0:l-glutamate ligase/coenzyme f420-1:gamma-l-glutamate ligaseEDF56_101454Not AvailablePositive454947 - 45568125841.0
lppg:fo 2-phospho-l-lactate transferaseEDF56_101455Not AvailablePositive455678 - 45662233126.8
fo synthase subunit 1 /fo synthase subunit 2EDF56_101456Not AvailablePositive456634 - 45895283213.9
tetr family transcriptional regulatorEDF56_101457Not AvailableNegative458922 - 45958424038.1
ubiquinone biosynthesis protein coq4EDF56_101458Not AvailablePositive459669 - 46043628310.1
glyoxalase/bleomycin resistance protein/dioxygenase superfamily proteinEDF56_101459Not AvailableNegative460423 - 46089618332.1

Displaying genes 511 – 520 of 5178 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.