Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | E1J03_04825 | Not Available | Negative | 1124284 - 1124640 | 13441.4 |
| protease | E1J03_04830 | Not Available | Positive | 1124830 - 1125360 | 18952.9 |
| pyridoxal phosphate-dependent aminotransferase | E1J03_04835 | Not Available | Positive | 1125427 - 1126602 | 44747.1 |
| tetratricopeptide repeat protein | E1J03_04845 | Not Available | Negative | 1127663 - 1128613 | 35731.7 |
| o-glcnacase | E1J03_04850 | Not Available | Negative | 1128628 - 1130841 | 84854.3 |
| recq family atp-dependent dna helicase | E1J03_04855 | Not Available | Negative | 1130888 - 1132783 | 73014.2 |
| single-stranded-dna-specific exonuclease recj | E1J03_04860 | Not Available | Negative | 1132901 - 1134673 | 66543.4 |
| aminopeptidase | E1J03_04865 | Not Available | Negative | 1134788 - 1135999 | 45984.5 |
| aminopeptidase p family protein | E1J03_04870 | Not Available | Negative | 1136028 - 1137419 | 51868.5 |
| patatin family protein | E1J03_04875 | Not Available | Positive | 1137749 - 1138603 | 32942.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

