Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | E1J03_04760 | Not Available | Negative | 1110206 - 1111213 | 37400.0 |
| iron abc transporter permease | E1J03_04765 | Not Available | Negative | 1111213 - 1112244 | 36155.8 |
| atp-dependent dna helicase recg | E1J03_04775 | Not Available | Negative | 1113375 - 1114775 | 52268.1 |
| hypothetical protein | E1J03_04780 | Not Available | Negative | 1114918 - 1116060 | 41048.2 |
| tonb-dependent receptor | E1J03_04785 | Not Available | Negative | 1116074 - 1118095 | 76728.7 |
| alpha/beta hydrolase | E1J03_04790 | Not Available | Positive | 1118652 - 1119623 | 34884.6 |
| duf2089 family protein | E1J03_04795 | Not Available | Positive | 1119625 - 1119906 | 10336.8 |
| prephenate dehydrogenase | E1J03_04805 | Not Available | Negative | 1120161 - 1120934 | 29349.4 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | E1J03_04815 | Not Available | Negative | 1122025 - 1123209 | 45025.2 |
| prephenate dehydratase | E1J03_04820 | Not Available | Negative | 1123184 - 1124026 | 31766.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

