Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin | E1J03_04710 | Not Available | Positive | 1098538 - 1099062 | 19475.1 |
| fad-binding protein | E1J03_04715 | Not Available | Negative | 1099148 - 1100791 | 60756.8 |
| duf1847 domain-containing protein | E1J03_04720 | Not Available | Negative | 1100806 - 1101447 | 24003.9 |
| dna repair protein rada | E1J03_04725 | Not Available | Negative | 1101493 - 1102860 | 49919.5 |
| duf3078 domain-containing protein | E1J03_04730 | Not Available | Positive | 1103117 - 1103998 | 32714.9 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | E1J03_04735 | Not Available | Positive | 1104595 - 1107027 | 88464.5 |
| cofactor-independent phosphoglycerate mutase | E1J03_04740 | Not Available | Positive | 1107032 - 1108243 | 44630.5 |
| threonine synthase | E1J03_04745 | Not Available | Positive | 1108334 - 1109635 | 47971.2 |
| hypothetical protein | E1J03_04750 | Not Available | Positive | 1109767 - 1109958 | 7315.85 |
| hypothetical protein | E1J03_04755 | Not Available | Positive | 1109999 - 1110196 | 7584.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

